Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
Pcdhb3Q91XZ7 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb3Q91XZ7 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC15.24■□□□□ 0.03
Pcdhb3Q91XZ7 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb3Q91XZ7 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb3Q91XZ7 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb3Q91XZ7 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb3Q91XZ7 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb3Q91XZ7 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb3Q91XZ7 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb3Q91XZ7 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb3Q91XZ7 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC15.23■□□□□ 0.03
Pcdhb3Q91XZ7 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC15.23■□□□□ 0.03
Pcdhb3Q91XZ7 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb3Q91XZ7 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb3Q91XZ7 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb3Q91XZ7 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb3Q91XZ7 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC15.23■□□□□ 0.03
Pcdhb3Q91XZ7 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC15.23■□□□□ 0.03
Pcdhb3Q91XZ7 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb3Q91XZ7 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC15.23■□□□□ 0.03
Pcdhb3Q91XZ7 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb3Q91XZ7 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb3Q91XZ7 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb3Q91XZ7 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb3Q91XZ7 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
Pcdhb3Q91XZ7 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb3Q91XZ7 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb3Q91XZ7 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb3Q91XZ7 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb3Q91XZ7 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC15.22■□□□□ 0.03
Pcdhb3Q91XZ7 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb3Q91XZ7 Slc35b2-202ENSMUST00000223987 1766 ntBASIC15.22■□□□□ 0.03
Pcdhb3Q91XZ7 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb3Q91XZ7 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
Pcdhb3Q91XZ7 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb3Q91XZ7 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb3Q91XZ7 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb3Q91XZ7 Gm29707-201ENSMUST00000196325 491 ntBASIC15.22■□□□□ 0.03
Pcdhb3Q91XZ7 Gm45328-201ENSMUST00000210942 917 ntBASIC15.22■□□□□ 0.03
Pcdhb3Q91XZ7 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb3Q91XZ7 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb3Q91XZ7 AC121805.2-201ENSMUST00000218808 2538 ntBASIC15.22■□□□□ 0.03
Pcdhb3Q91XZ7 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb3Q91XZ7 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Pcdhb3Q91XZ7 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb3Q91XZ7 Matn2-206ENSMUST00000228570 2798 ntBASIC15.22■□□□□ 0.03
Pcdhb3Q91XZ7 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb3Q91XZ7 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb3Q91XZ7 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb3Q91XZ7 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb3Q91XZ7 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhb3Q91XZ7 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Pcdhb3Q91XZ7 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhb3Q91XZ7 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhb3Q91XZ7 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Pcdhb3Q91XZ7 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhb3Q91XZ7 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhb3Q91XZ7 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Pcdhb3Q91XZ7 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhb3Q91XZ7 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhb3Q91XZ7 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhb3Q91XZ7 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhb3Q91XZ7 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhb3Q91XZ7 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhb3Q91XZ7 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhb3Q91XZ7 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhb3Q91XZ7 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC15.21■□□□□ 0.03
Pcdhb3Q91XZ7 Gm27357-201ENSMUST00000183754 135 ntBASIC15.21■□□□□ 0.03
Pcdhb3Q91XZ7 Gm37592-201ENSMUST00000192741 373 ntTSL 5 BASIC15.21■□□□□ 0.03
Pcdhb3Q91XZ7 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC15.21■□□□□ 0.03
Pcdhb3Q91XZ7 Gm18421-201ENSMUST00000204122 625 ntBASIC15.21■□□□□ 0.03
Pcdhb3Q91XZ7 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhb3Q91XZ7 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhb3Q91XZ7 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhb3Q91XZ7 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhb3Q91XZ7 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhb3Q91XZ7 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC15.21■□□□□ 0.03
Pcdhb3Q91XZ7 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhb3Q91XZ7 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhb3Q91XZ7 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Pcdhb3Q91XZ7 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Pcdhb3Q91XZ7 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC15.21■□□□□ 0.02
Pcdhb3Q91XZ7 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb3Q91XZ7 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb3Q91XZ7 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Pcdhb3Q91XZ7 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb3Q91XZ7 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb3Q91XZ7 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb3Q91XZ7 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb3Q91XZ7 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb3Q91XZ7 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb3Q91XZ7 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb3Q91XZ7 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb3Q91XZ7 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb3Q91XZ7 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Pcdhb3Q91XZ7 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb3Q91XZ7 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb3Q91XZ7 Gm13857-203ENSMUST00000150561 2337 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb3Q91XZ7 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms