Protein–RNA interactions for Protein: Q91XZ5

Pcdhb5, Protocadherin beta 5, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb5Q91XZ5 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
Pcdhb5Q91XZ5 Gm9824-201ENSMUST00000178707 561 ntBASIC17.83■□□□□ 0.44
Pcdhb5Q91XZ5 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdhb5Q91XZ5 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC17.83■□□□□ 0.44
Pcdhb5Q91XZ5 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Pcdhb5Q91XZ5 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdhb5Q91XZ5 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC17.83■□□□□ 0.44
Pcdhb5Q91XZ5 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdhb5Q91XZ5 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdhb5Q91XZ5 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdhb5Q91XZ5 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdhb5Q91XZ5 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdhb5Q91XZ5 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdhb5Q91XZ5 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdhb5Q91XZ5 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdhb5Q91XZ5 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdhb5Q91XZ5 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Pcdhb5Q91XZ5 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb5Q91XZ5 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb5Q91XZ5 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC17.82■□□□□ 0.44
Pcdhb5Q91XZ5 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb5Q91XZ5 Gm13233-201ENSMUST00000118760 1443 ntBASIC17.82■□□□□ 0.44
Pcdhb5Q91XZ5 Gm13244-201ENSMUST00000118855 1446 ntBASIC17.82■□□□□ 0.44
Pcdhb5Q91XZ5 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb5Q91XZ5 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb5Q91XZ5 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Pcdhb5Q91XZ5 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Pcdhb5Q91XZ5 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb5Q91XZ5 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb5Q91XZ5 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb5Q91XZ5 Gm6415-201ENSMUST00000118488 348 ntBASIC17.82■□□□□ 0.44
Pcdhb5Q91XZ5 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb5Q91XZ5 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
Pcdhb5Q91XZ5 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC17.82■□□□□ 0.44
Pcdhb5Q91XZ5 Gm37277-201ENSMUST00000194052 1111 ntBASIC17.82■□□□□ 0.44
Pcdhb5Q91XZ5 AC164567.1-201ENSMUST00000219185 960 ntBASIC17.82■□□□□ 0.44
Pcdhb5Q91XZ5 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb5Q91XZ5 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb5Q91XZ5 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb5Q91XZ5 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb5Q91XZ5 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb5Q91XZ5 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb5Q91XZ5 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb5Q91XZ5 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb5Q91XZ5 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb5Q91XZ5 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb5Q91XZ5 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC17.81■□□□□ 0.44
Pcdhb5Q91XZ5 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb5Q91XZ5 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb5Q91XZ5 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb5Q91XZ5 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb5Q91XZ5 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb5Q91XZ5 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb5Q91XZ5 Gm42934-201ENSMUST00000196920 1345 ntBASIC17.81■□□□□ 0.44
Pcdhb5Q91XZ5 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb5Q91XZ5 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb5Q91XZ5 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb5Q91XZ5 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Pcdhb5Q91XZ5 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Pcdhb5Q91XZ5 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Pcdhb5Q91XZ5 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb5Q91XZ5 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC17.81■□□□□ 0.44
Pcdhb5Q91XZ5 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Pcdhb5Q91XZ5 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb5Q91XZ5 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Pcdhb5Q91XZ5 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC17.81■□□□□ 0.44
Pcdhb5Q91XZ5 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Pcdhb5Q91XZ5 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Pcdhb5Q91XZ5 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb5Q91XZ5 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Pcdhb5Q91XZ5 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb5Q91XZ5 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Pcdhb5Q91XZ5 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb5Q91XZ5 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC17.81■□□□□ 0.44
Pcdhb5Q91XZ5 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb5Q91XZ5 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
Pcdhb5Q91XZ5 Gm20628-201ENSMUST00000177363 3215 ntBASIC17.8■□□□□ 0.44
Pcdhb5Q91XZ5 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhb5Q91XZ5 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC17.8■□□□□ 0.44
Pcdhb5Q91XZ5 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhb5Q91XZ5 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Pcdhb5Q91XZ5 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Pcdhb5Q91XZ5 App-207ENSMUST00000227737 2827 ntBASIC17.8■□□□□ 0.44
Pcdhb5Q91XZ5 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Pcdhb5Q91XZ5 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC17.8■□□□□ 0.44
Pcdhb5Q91XZ5 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Pcdhb5Q91XZ5 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhb5Q91XZ5 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC17.8■□□□□ 0.44
Pcdhb5Q91XZ5 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhb5Q91XZ5 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhb5Q91XZ5 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhb5Q91XZ5 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhb5Q91XZ5 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC17.8■□□□□ 0.44
Pcdhb5Q91XZ5 Gm13517-201ENSMUST00000120782 1495 ntBASIC17.8■□□□□ 0.44
Pcdhb5Q91XZ5 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhb5Q91XZ5 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhb5Q91XZ5 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhb5Q91XZ5 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC17.8■□□□□ 0.44
Pcdhb5Q91XZ5 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
Pcdhb5Q91XZ5 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms