Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vsx1Q91V10 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Vsx1Q91V10 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Vsx1Q91V10 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC15.01□□□□□ -0.01
Vsx1Q91V10 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vsx1Q91V10 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC15.01□□□□□ -0.01
Vsx1Q91V10 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vsx1Q91V10 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Vsx1Q91V10 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vsx1Q91V10 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vsx1Q91V10 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vsx1Q91V10 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Vsx1Q91V10 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Vsx1Q91V10 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Vsx1Q91V10 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Vsx1Q91V10 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
Vsx1Q91V10 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Vsx1Q91V10 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC15□□□□□ -0.01
Vsx1Q91V10 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Vsx1Q91V10 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC15□□□□□ -0.01
Vsx1Q91V10 Gm17837-201ENSMUST00000186435 985 ntBASIC15□□□□□ -0.01
Vsx1Q91V10 Gm7653-201ENSMUST00000214567 508 ntBASIC15□□□□□ -0.01
Vsx1Q91V10 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Vsx1Q91V10 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Vsx1Q91V10 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Vsx1Q91V10 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Vsx1Q91V10 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC15□□□□□ -0.01
Vsx1Q91V10 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Vsx1Q91V10 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Vsx1Q91V10 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Vsx1Q91V10 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC15□□□□□ -0.01
Vsx1Q91V10 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Vsx1Q91V10 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Vsx1Q91V10 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Vsx1Q91V10 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Vsx1Q91V10 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Vsx1Q91V10 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Vsx1Q91V10 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Vsx1Q91V10 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Vsx1Q91V10 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Vsx1Q91V10 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC14.99□□□□□ -0.01
Vsx1Q91V10 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Vsx1Q91V10 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Vsx1Q91V10 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Vsx1Q91V10 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC14.99□□□□□ -0.01
Vsx1Q91V10 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Vsx1Q91V10 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Vsx1Q91V10 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Vsx1Q91V10 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Vsx1Q91V10 Gm15693-201ENSMUST00000120470 637 ntBASIC14.99□□□□□ -0.01
Vsx1Q91V10 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC14.99□□□□□ -0.01
Vsx1Q91V10 Mir8102-201ENSMUST00000184148 139 ntBASIC14.99□□□□□ -0.01
Vsx1Q91V10 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Vsx1Q91V10 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Vsx1Q91V10 Rbfox2-208ENSMUST00000227930 1218 ntBASIC14.99□□□□□ -0.01
Vsx1Q91V10 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Vsx1Q91V10 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Vsx1Q91V10 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Vsx1Q91V10 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC14.99□□□□□ -0.01
Vsx1Q91V10 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC14.99□□□□□ -0.01
Vsx1Q91V10 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Vsx1Q91V10 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vsx1Q91V10 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Vsx1Q91V10 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
Vsx1Q91V10 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC14.98□□□□□ -0.01
Vsx1Q91V10 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Vsx1Q91V10 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vsx1Q91V10 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Vsx1Q91V10 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC14.98□□□□□ -0.01
Vsx1Q91V10 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC14.98□□□□□ -0.01
Vsx1Q91V10 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC14.98□□□□□ -0.01
Vsx1Q91V10 Gm6257-201ENSMUST00000163864 910 ntBASIC14.98□□□□□ -0.01
Vsx1Q91V10 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Vsx1Q91V10 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Vsx1Q91V10 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Vsx1Q91V10 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vsx1Q91V10 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vsx1Q91V10 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
Vsx1Q91V10 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vsx1Q91V10 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vsx1Q91V10 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vsx1Q91V10 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vsx1Q91V10 Gm5184-201ENSMUST00000220417 1702 ntBASIC14.97□□□□□ -0.01
Vsx1Q91V10 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC14.97□□□□□ -0.01
Vsx1Q91V10 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Vsx1Q91V10 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Vsx1Q91V10 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Vsx1Q91V10 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Vsx1Q91V10 Wnt10b-206ENSMUST00000228546 2709 ntBASIC14.97□□□□□ -0.01
Vsx1Q91V10 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Vsx1Q91V10 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Vsx1Q91V10 Gm6415-201ENSMUST00000118488 348 ntBASIC14.97□□□□□ -0.01
Vsx1Q91V10 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Vsx1Q91V10 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Vsx1Q91V10 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Vsx1Q91V10 AC166341.4-201ENSMUST00000220625 123 ntBASIC14.97□□□□□ -0.01
Vsx1Q91V10 CT030684.1-201ENSMUST00000227292 914 ntBASIC14.97□□□□□ -0.01
Vsx1Q91V10 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Vsx1Q91V10 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Vsx1Q91V10 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 9.8 ms