Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim60Q8VI40 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim60Q8VI40 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Trim60Q8VI40 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim60Q8VI40 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim60Q8VI40 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim60Q8VI40 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trim60Q8VI40 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim60Q8VI40 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim60Q8VI40 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trim60Q8VI40 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim60Q8VI40 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim60Q8VI40 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim60Q8VI40 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC15.71■□□□□ 0.11
Trim60Q8VI40 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Trim60Q8VI40 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Trim60Q8VI40 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC15.71■□□□□ 0.11
Trim60Q8VI40 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim60Q8VI40 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
Trim60Q8VI40 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC15.71■□□□□ 0.11
Trim60Q8VI40 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim60Q8VI40 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim60Q8VI40 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC15.71■□□□□ 0.11
Trim60Q8VI40 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
Trim60Q8VI40 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Trim60Q8VI40 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Trim60Q8VI40 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trim60Q8VI40 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Trim60Q8VI40 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim60Q8VI40 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.11
Trim60Q8VI40 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim60Q8VI40 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim60Q8VI40 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim60Q8VI40 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
Trim60Q8VI40 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Trim60Q8VI40 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Trim60Q8VI40 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC15.71■□□□□ 0.1
Trim60Q8VI40 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim60Q8VI40 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim60Q8VI40 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim60Q8VI40 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trim60Q8VI40 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim60Q8VI40 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Trim60Q8VI40 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim60Q8VI40 Gm8242-201ENSMUST00000193029 1420 ntBASIC15.7■□□□□ 0.1
Trim60Q8VI40 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Trim60Q8VI40 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim60Q8VI40 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim60Q8VI40 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim60Q8VI40 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trim60Q8VI40 Gm8318-201ENSMUST00000182954 872 ntBASIC15.7■□□□□ 0.1
Trim60Q8VI40 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC15.7■□□□□ 0.1
Trim60Q8VI40 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
Trim60Q8VI40 AC093926.2-201ENSMUST00000214468 1228 ntBASIC15.7■□□□□ 0.1
Trim60Q8VI40 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim60Q8VI40 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim60Q8VI40 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Trim60Q8VI40 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trim60Q8VI40 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Trim60Q8VI40 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trim60Q8VI40 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trim60Q8VI40 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
Trim60Q8VI40 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Trim60Q8VI40 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim60Q8VI40 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trim60Q8VI40 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
Trim60Q8VI40 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC15.69■□□□□ 0.1
Trim60Q8VI40 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trim60Q8VI40 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim60Q8VI40 Camk2g-217ENSMUST00000226630 1937 ntBASIC15.69■□□□□ 0.1
Trim60Q8VI40 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim60Q8VI40 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
Trim60Q8VI40 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC15.69■□□□□ 0.1
Trim60Q8VI40 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC15.69■□□□□ 0.1
Trim60Q8VI40 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trim60Q8VI40 Gm27357-201ENSMUST00000183754 135 ntBASIC15.69■□□□□ 0.1
Trim60Q8VI40 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC15.69■□□□□ 0.1
Trim60Q8VI40 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trim60Q8VI40 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Trim60Q8VI40 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim60Q8VI40 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC15.69■□□□□ 0.1
Trim60Q8VI40 AC124569.2-201ENSMUST00000225998 818 ntBASIC15.69■□□□□ 0.1
Trim60Q8VI40 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim60Q8VI40 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim60Q8VI40 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim60Q8VI40 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trim60Q8VI40 AC157650.3-201ENSMUST00000225058 1476 ntBASIC15.69■□□□□ 0.1
Trim60Q8VI40 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim60Q8VI40 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim60Q8VI40 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim60Q8VI40 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Trim60Q8VI40 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim60Q8VI40 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim60Q8VI40 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC15.69■□□□□ 0.1
Trim60Q8VI40 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim60Q8VI40 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
Trim60Q8VI40 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim60Q8VI40 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim60Q8VI40 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim60Q8VI40 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 105.3 ms