Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdh18Q8VHR0 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdh18Q8VHR0 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdh18Q8VHR0 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC14.69□□□□□ -0.06
Pcdh18Q8VHR0 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC14.69□□□□□ -0.06
Pcdh18Q8VHR0 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC14.69□□□□□ -0.06
Pcdh18Q8VHR0 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdh18Q8VHR0 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdh18Q8VHR0 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdh18Q8VHR0 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC14.69□□□□□ -0.06
Pcdh18Q8VHR0 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Pcdh18Q8VHR0 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdh18Q8VHR0 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdh18Q8VHR0 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdh18Q8VHR0 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdh18Q8VHR0 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdh18Q8VHR0 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdh18Q8VHR0 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC14.68□□□□□ -0.06
Pcdh18Q8VHR0 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdh18Q8VHR0 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdh18Q8VHR0 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdh18Q8VHR0 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC14.68□□□□□ -0.06
Pcdh18Q8VHR0 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdh18Q8VHR0 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdh18Q8VHR0 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdh18Q8VHR0 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdh18Q8VHR0 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdh18Q8VHR0 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdh18Q8VHR0 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdh18Q8VHR0 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
Pcdh18Q8VHR0 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
Pcdh18Q8VHR0 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdh18Q8VHR0 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC14.68□□□□□ -0.06
Pcdh18Q8VHR0 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC14.68□□□□□ -0.06
Pcdh18Q8VHR0 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Pcdh18Q8VHR0 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdh18Q8VHR0 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdh18Q8VHR0 Efs-202ENSMUST00000227037 2540 ntBASIC14.68□□□□□ -0.06
Pcdh18Q8VHR0 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
Pcdh18Q8VHR0 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC14.68□□□□□ -0.06
Pcdh18Q8VHR0 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdh18Q8VHR0 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdh18Q8VHR0 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdh18Q8VHR0 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdh18Q8VHR0 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdh18Q8VHR0 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
Pcdh18Q8VHR0 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Pcdh18Q8VHR0 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC14.67□□□□□ -0.06
Pcdh18Q8VHR0 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdh18Q8VHR0 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdh18Q8VHR0 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdh18Q8VHR0 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdh18Q8VHR0 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdh18Q8VHR0 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdh18Q8VHR0 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdh18Q8VHR0 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdh18Q8VHR0 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdh18Q8VHR0 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdh18Q8VHR0 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdh18Q8VHR0 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdh18Q8VHR0 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdh18Q8VHR0 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdh18Q8VHR0 AC114585.2-202ENSMUST00000228094 426 ntBASIC14.67□□□□□ -0.06
Pcdh18Q8VHR0 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdh18Q8VHR0 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdh18Q8VHR0 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Pcdh18Q8VHR0 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdh18Q8VHR0 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdh18Q8VHR0 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdh18Q8VHR0 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdh18Q8VHR0 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC14.67□□□□□ -0.06
Pcdh18Q8VHR0 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdh18Q8VHR0 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdh18Q8VHR0 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdh18Q8VHR0 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdh18Q8VHR0 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Pcdh18Q8VHR0 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdh18Q8VHR0 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdh18Q8VHR0 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdh18Q8VHR0 Nupl1-207ENSMUST00000225311 2475 ntBASIC14.67□□□□□ -0.06
Pcdh18Q8VHR0 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdh18Q8VHR0 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Pcdh18Q8VHR0 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdh18Q8VHR0 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdh18Q8VHR0 Gm38391-201ENSMUST00000191720 4069 ntBASIC14.66□□□□□ -0.06
Pcdh18Q8VHR0 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdh18Q8VHR0 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdh18Q8VHR0 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdh18Q8VHR0 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC14.66□□□□□ -0.06
Pcdh18Q8VHR0 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdh18Q8VHR0 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdh18Q8VHR0 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Pcdh18Q8VHR0 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdh18Q8VHR0 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdh18Q8VHR0 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Pcdh18Q8VHR0 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdh18Q8VHR0 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdh18Q8VHR0 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdh18Q8VHR0 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdh18Q8VHR0 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC14.66□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms