Protein–RNA interactions for Protein: Q8VC34

Rpap2, Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap2Q8VC34 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rpap2Q8VC34 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rpap2Q8VC34 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Rpap2Q8VC34 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rpap2Q8VC34 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rpap2Q8VC34 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rpap2Q8VC34 Gm29361-201ENSMUST00000183323 2000 ntBASIC16.64■□□□□ 0.25
Rpap2Q8VC34 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rpap2Q8VC34 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Rpap2Q8VC34 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC16.64■□□□□ 0.25
Rpap2Q8VC34 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rpap2Q8VC34 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC16.64■□□□□ 0.25
Rpap2Q8VC34 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC16.64■□□□□ 0.25
Rpap2Q8VC34 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Rpap2Q8VC34 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rpap2Q8VC34 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC16.64■□□□□ 0.25
Rpap2Q8VC34 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Rpap2Q8VC34 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rpap2Q8VC34 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rpap2Q8VC34 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC16.64■□□□□ 0.25
Rpap2Q8VC34 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rpap2Q8VC34 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rpap2Q8VC34 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rpap2Q8VC34 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rpap2Q8VC34 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rpap2Q8VC34 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Rpap2Q8VC34 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Rpap2Q8VC34 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rpap2Q8VC34 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rpap2Q8VC34 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rpap2Q8VC34 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rpap2Q8VC34 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rpap2Q8VC34 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC16.63■□□□□ 0.25
Rpap2Q8VC34 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC16.63■□□□□ 0.25
Rpap2Q8VC34 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rpap2Q8VC34 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rpap2Q8VC34 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rpap2Q8VC34 Ptprs-211ENSMUST00000223859 5588 ntBASIC16.63■□□□□ 0.25
Rpap2Q8VC34 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Rpap2Q8VC34 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rpap2Q8VC34 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Rpap2Q8VC34 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rpap2Q8VC34 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rpap2Q8VC34 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rpap2Q8VC34 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Rpap2Q8VC34 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rpap2Q8VC34 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Rpap2Q8VC34 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Rpap2Q8VC34 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rpap2Q8VC34 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rpap2Q8VC34 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Rpap2Q8VC34 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rpap2Q8VC34 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rpap2Q8VC34 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Rpap2Q8VC34 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rpap2Q8VC34 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Rpap2Q8VC34 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC16.62■□□□□ 0.25
Rpap2Q8VC34 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rpap2Q8VC34 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Rpap2Q8VC34 Gm1401-201ENSMUST00000122048 772 ntBASIC16.62■□□□□ 0.25
Rpap2Q8VC34 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC16.62■□□□□ 0.25
Rpap2Q8VC34 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Rpap2Q8VC34 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Rpap2Q8VC34 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Rpap2Q8VC34 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rpap2Q8VC34 Gm43767-201ENSMUST00000198933 381 ntBASIC16.62■□□□□ 0.25
Rpap2Q8VC34 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Rpap2Q8VC34 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Rpap2Q8VC34 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rpap2Q8VC34 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC16.62■□□□□ 0.25
Rpap2Q8VC34 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC16.62■□□□□ 0.25
Rpap2Q8VC34 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rpap2Q8VC34 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Rpap2Q8VC34 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rpap2Q8VC34 AC154412.1-201ENSMUST00000226540 2786 ntBASIC16.62■□□□□ 0.25
Rpap2Q8VC34 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rpap2Q8VC34 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC16.62■□□□□ 0.25
Rpap2Q8VC34 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rpap2Q8VC34 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rpap2Q8VC34 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rpap2Q8VC34 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rpap2Q8VC34 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rpap2Q8VC34 Sybu-209ENSMUST00000228639 4113 ntBASIC16.62■□□□□ 0.25
Rpap2Q8VC34 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Rpap2Q8VC34 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC16.62■□□□□ 0.25
Rpap2Q8VC34 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rpap2Q8VC34 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC16.62■□□□□ 0.25
Rpap2Q8VC34 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rpap2Q8VC34 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Rpap2Q8VC34 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Rpap2Q8VC34 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rpap2Q8VC34 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rpap2Q8VC34 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rpap2Q8VC34 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Rpap2Q8VC34 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rpap2Q8VC34 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Rpap2Q8VC34 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rpap2Q8VC34 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Rpap2Q8VC34 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC16.61■□□□□ 0.25
Rpap2Q8VC34 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC16.61■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms