Protein–RNA interactions for Protein: Q8R422

Cd109, CD109 antigen, mousemouse

Predictions only

Length 1,442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd109Q8R422 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
Cd109Q8R422 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Cd109Q8R422 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Cd109Q8R422 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Cd109Q8R422 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC21.35■■□□□ 1.01
Cd109Q8R422 Gm14719-201ENSMUST00000121891 340 ntBASIC21.35■■□□□ 1.01
Cd109Q8R422 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
Cd109Q8R422 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Cd109Q8R422 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC21.35■■□□□ 1.01
Cd109Q8R422 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Cd109Q8R422 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Cd109Q8R422 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Cd109Q8R422 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Cd109Q8R422 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Cd109Q8R422 AC093043.3-201ENSMUST00000226531 2273 ntBASIC21.35■■□□□ 1.01
Cd109Q8R422 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Cd109Q8R422 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Cd109Q8R422 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC21.34■■□□□ 1.01
Cd109Q8R422 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Cd109Q8R422 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Cd109Q8R422 AC124751.1-201ENSMUST00000222716 1408 ntBASIC21.34■■□□□ 1.01
Cd109Q8R422 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Cd109Q8R422 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Cd109Q8R422 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC21.34■■□□□ 1.01
Cd109Q8R422 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
Cd109Q8R422 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Cd109Q8R422 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC21.33■■□□□ 1.01
Cd109Q8R422 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Cd109Q8R422 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
Cd109Q8R422 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Cd109Q8R422 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC21.33■■□□□ 1.01
Cd109Q8R422 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1.01
Cd109Q8R422 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Cd109Q8R422 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC21.33■■□□□ 1.01
Cd109Q8R422 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC21.33■■□□□ 1.01
Cd109Q8R422 AC132863.2-201ENSMUST00000226643 799 ntBASIC21.33■■□□□ 1.01
Cd109Q8R422 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Cd109Q8R422 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Cd109Q8R422 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Cd109Q8R422 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Cd109Q8R422 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Cd109Q8R422 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Cd109Q8R422 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC21.33■■□□□ 1
Cd109Q8R422 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
Cd109Q8R422 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1
Cd109Q8R422 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Cd109Q8R422 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC21.33■■□□□ 1
Cd109Q8R422 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Cd109Q8R422 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Cd109Q8R422 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Cd109Q8R422 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC21.32■■□□□ 1
Cd109Q8R422 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC21.32■■□□□ 1
Cd109Q8R422 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC21.32■■□□□ 1
Cd109Q8R422 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC21.32■■□□□ 1
Cd109Q8R422 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
Cd109Q8R422 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC21.32■■□□□ 1
Cd109Q8R422 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Cd109Q8R422 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Cd109Q8R422 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Cd109Q8R422 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC21.32■■□□□ 1
Cd109Q8R422 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Cd109Q8R422 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Cd109Q8R422 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Cd109Q8R422 Prob1-201ENSMUST00000097619 3021 ntBASIC21.32■■□□□ 1
Cd109Q8R422 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
Cd109Q8R422 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Cd109Q8R422 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Cd109Q8R422 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Cd109Q8R422 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Cd109Q8R422 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Cd109Q8R422 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Cd109Q8R422 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Cd109Q8R422 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Cd109Q8R422 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Cd109Q8R422 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Cd109Q8R422 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC21.31■■□□□ 1
Cd109Q8R422 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC21.31■■□□□ 1
Cd109Q8R422 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Cd109Q8R422 Gm5566-201ENSMUST00000116118 459 ntBASIC21.31■■□□□ 1
Cd109Q8R422 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC21.31■■□□□ 1
Cd109Q8R422 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC21.31■■□□□ 1
Cd109Q8R422 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC21.31■■□□□ 1
Cd109Q8R422 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC21.31■■□□□ 1
Cd109Q8R422 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Cd109Q8R422 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC21.31■■□□□ 1
Cd109Q8R422 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Cd109Q8R422 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC21.31■■□□□ 1
Cd109Q8R422 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
Cd109Q8R422 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC21.31■■□□□ 1
Cd109Q8R422 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Cd109Q8R422 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Cd109Q8R422 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC21.31■■□□□ 1
Cd109Q8R422 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Cd109Q8R422 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC21.31■■□□□ 1
Cd109Q8R422 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Cd109Q8R422 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Cd109Q8R422 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Cd109Q8R422 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Cd109Q8R422 Gm24543-201ENSMUST00000103867 82 ntBASIC21.3■■□□□ 1
Cd109Q8R422 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC21.3■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms