Protein–RNA interactions for Protein: Q8R2Q0

Trim29, Tripartite motif-containing protein 29, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim29Q8R2Q0 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim29Q8R2Q0 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Trim29Q8R2Q0 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Trim29Q8R2Q0 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim29Q8R2Q0 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC17.36■□□□□ 0.37
Trim29Q8R2Q0 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim29Q8R2Q0 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim29Q8R2Q0 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
Trim29Q8R2Q0 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Trim29Q8R2Q0 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim29Q8R2Q0 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim29Q8R2Q0 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Trim29Q8R2Q0 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim29Q8R2Q0 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Trim29Q8R2Q0 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Trim29Q8R2Q0 Gm7862-201ENSMUST00000121461 292 ntBASIC17.35■□□□□ 0.37
Trim29Q8R2Q0 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Trim29Q8R2Q0 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC17.35■□□□□ 0.37
Trim29Q8R2Q0 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC17.35■□□□□ 0.37
Trim29Q8R2Q0 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim29Q8R2Q0 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim29Q8R2Q0 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim29Q8R2Q0 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Trim29Q8R2Q0 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim29Q8R2Q0 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim29Q8R2Q0 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Trim29Q8R2Q0 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim29Q8R2Q0 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim29Q8R2Q0 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim29Q8R2Q0 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim29Q8R2Q0 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim29Q8R2Q0 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim29Q8R2Q0 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Trim29Q8R2Q0 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Trim29Q8R2Q0 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Trim29Q8R2Q0 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim29Q8R2Q0 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Trim29Q8R2Q0 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim29Q8R2Q0 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Trim29Q8R2Q0 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
Trim29Q8R2Q0 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
Trim29Q8R2Q0 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Trim29Q8R2Q0 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Trim29Q8R2Q0 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim29Q8R2Q0 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Trim29Q8R2Q0 Gm5864-201ENSMUST00000202263 970 ntBASIC17.34■□□□□ 0.37
Trim29Q8R2Q0 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Trim29Q8R2Q0 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Trim29Q8R2Q0 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim29Q8R2Q0 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim29Q8R2Q0 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim29Q8R2Q0 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim29Q8R2Q0 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Trim29Q8R2Q0 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Trim29Q8R2Q0 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim29Q8R2Q0 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim29Q8R2Q0 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim29Q8R2Q0 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim29Q8R2Q0 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim29Q8R2Q0 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim29Q8R2Q0 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trim29Q8R2Q0 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trim29Q8R2Q0 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Trim29Q8R2Q0 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.37
Trim29Q8R2Q0 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Trim29Q8R2Q0 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.37
Trim29Q8R2Q0 Gm7901-201ENSMUST00000120430 1597 ntBASIC17.33■□□□□ 0.37
Trim29Q8R2Q0 Gm43352-201ENSMUST00000196419 3065 ntBASIC17.33■□□□□ 0.37
Trim29Q8R2Q0 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC17.33■□□□□ 0.37
Trim29Q8R2Q0 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim29Q8R2Q0 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim29Q8R2Q0 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim29Q8R2Q0 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Trim29Q8R2Q0 Gm38042-201ENSMUST00000191614 5208 ntBASIC17.33■□□□□ 0.36
Trim29Q8R2Q0 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim29Q8R2Q0 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim29Q8R2Q0 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim29Q8R2Q0 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim29Q8R2Q0 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim29Q8R2Q0 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim29Q8R2Q0 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim29Q8R2Q0 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC17.33■□□□□ 0.36
Trim29Q8R2Q0 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim29Q8R2Q0 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim29Q8R2Q0 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim29Q8R2Q0 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim29Q8R2Q0 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
Trim29Q8R2Q0 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trim29Q8R2Q0 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim29Q8R2Q0 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trim29Q8R2Q0 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim29Q8R2Q0 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
Trim29Q8R2Q0 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC17.32■□□□□ 0.36
Trim29Q8R2Q0 Gm6550-201ENSMUST00000187574 993 ntBASIC17.32■□□□□ 0.36
Trim29Q8R2Q0 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trim29Q8R2Q0 Gm7787-201ENSMUST00000216858 688 ntBASIC17.32■□□□□ 0.36
Trim29Q8R2Q0 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC17.32■□□□□ 0.36
Trim29Q8R2Q0 AC161829.1-201ENSMUST00000220298 281 ntBASIC17.32■□□□□ 0.36
Trim29Q8R2Q0 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim29Q8R2Q0 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC17.32■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms