Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC19.36■□□□□ 0.69
Chmp7Q8R1T1 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC19.36■□□□□ 0.69
Chmp7Q8R1T1 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC19.36■□□□□ 0.69
Chmp7Q8R1T1 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Chmp7Q8R1T1 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Chmp7Q8R1T1 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Chmp7Q8R1T1 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Chmp7Q8R1T1 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Chmp7Q8R1T1 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Chmp7Q8R1T1 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Chmp7Q8R1T1 Gm45244-201ENSMUST00000211328 2200 ntBASIC19.36■□□□□ 0.69
Chmp7Q8R1T1 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Chmp7Q8R1T1 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC19.36■□□□□ 0.69
Chmp7Q8R1T1 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Chmp7Q8R1T1 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC19.35■□□□□ 0.69
Chmp7Q8R1T1 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
Chmp7Q8R1T1 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Chmp7Q8R1T1 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC19.35■□□□□ 0.69
Chmp7Q8R1T1 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Chmp7Q8R1T1 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Chmp7Q8R1T1 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Chmp7Q8R1T1 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Chmp7Q8R1T1 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Chmp7Q8R1T1 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Chmp7Q8R1T1 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Chmp7Q8R1T1 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC19.35■□□□□ 0.69
Chmp7Q8R1T1 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC19.35■□□□□ 0.69
Chmp7Q8R1T1 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC19.35■□□□□ 0.69
Chmp7Q8R1T1 Gm27618-201ENSMUST00000183671 60 ntBASIC19.35■□□□□ 0.69
Chmp7Q8R1T1 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Chmp7Q8R1T1 Gm5626-201ENSMUST00000222151 1058 ntBASIC19.35■□□□□ 0.69
Chmp7Q8R1T1 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Chmp7Q8R1T1 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC19.35■□□□□ 0.69
Chmp7Q8R1T1 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Chmp7Q8R1T1 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Chmp7Q8R1T1 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC19.35■□□□□ 0.69
Chmp7Q8R1T1 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Chmp7Q8R1T1 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Chmp7Q8R1T1 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Chmp7Q8R1T1 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Chmp7Q8R1T1 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Chmp7Q8R1T1 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Chmp7Q8R1T1 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Chmp7Q8R1T1 Gm14026-201ENSMUST00000120625 1789 ntBASIC19.34■□□□□ 0.69
Chmp7Q8R1T1 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Chmp7Q8R1T1 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Chmp7Q8R1T1 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Chmp7Q8R1T1 Gm13223-201ENSMUST00000118609 747 ntBASIC19.34■□□□□ 0.69
Chmp7Q8R1T1 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC19.34■□□□□ 0.69
Chmp7Q8R1T1 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC19.34■□□□□ 0.69
Chmp7Q8R1T1 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC19.34■□□□□ 0.69
Chmp7Q8R1T1 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Chmp7Q8R1T1 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Chmp7Q8R1T1 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC19.34■□□□□ 0.69
Chmp7Q8R1T1 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Chmp7Q8R1T1 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Chmp7Q8R1T1 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Chmp7Q8R1T1 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Chmp7Q8R1T1 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC19.34■□□□□ 0.69
Chmp7Q8R1T1 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Chmp7Q8R1T1 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Chmp7Q8R1T1 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Chmp7Q8R1T1 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Chmp7Q8R1T1 AC131743.5-201ENSMUST00000220775 1618 ntBASIC19.33■□□□□ 0.69
Chmp7Q8R1T1 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Chmp7Q8R1T1 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Chmp7Q8R1T1 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Chmp7Q8R1T1 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Chmp7Q8R1T1 Gm8410-201ENSMUST00000117225 605 ntBASIC19.33■□□□□ 0.68
Chmp7Q8R1T1 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Chmp7Q8R1T1 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Chmp7Q8R1T1 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Chmp7Q8R1T1 Gm27920-201ENSMUST00000183953 96 ntBASIC19.33■□□□□ 0.68
Chmp7Q8R1T1 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC19.33■□□□□ 0.68
Chmp7Q8R1T1 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Chmp7Q8R1T1 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Chmp7Q8R1T1 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Chmp7Q8R1T1 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Chmp7Q8R1T1 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Chmp7Q8R1T1 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Chmp7Q8R1T1 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Chmp7Q8R1T1 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC19.33■□□□□ 0.68
Chmp7Q8R1T1 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Chmp7Q8R1T1 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC19.32■□□□□ 0.68
Chmp7Q8R1T1 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Chmp7Q8R1T1 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Chmp7Q8R1T1 Gm12428-201ENSMUST00000119844 727 ntBASIC19.32■□□□□ 0.68
Chmp7Q8R1T1 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Chmp7Q8R1T1 Mir6977-201ENSMUST00000184960 64 ntBASIC19.32■□□□□ 0.68
Chmp7Q8R1T1 AC164567.1-201ENSMUST00000219185 960 ntBASIC19.32■□□□□ 0.68
Chmp7Q8R1T1 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Chmp7Q8R1T1 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Chmp7Q8R1T1 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Chmp7Q8R1T1 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Chmp7Q8R1T1 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Chmp7Q8R1T1 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Chmp7Q8R1T1 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Chmp7Q8R1T1 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Chmp7Q8R1T1 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Chmp7Q8R1T1 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms