Protein–RNA interactions for Protein: Q8R1C3

Vopp1, Vesicular, overexpressed in cancer, prosurvival protein 1, mousemouse

Predictions only

Length 172 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vopp1Q8R1C3 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Vopp1Q8R1C3 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Vopp1Q8R1C3 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Vopp1Q8R1C3 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Vopp1Q8R1C3 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Vopp1Q8R1C3 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC15.95■□□□□ 0.14
Vopp1Q8R1C3 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Vopp1Q8R1C3 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Vopp1Q8R1C3 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Vopp1Q8R1C3 Gm21009-201ENSMUST00000197169 1669 ntBASIC15.95■□□□□ 0.14
Vopp1Q8R1C3 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC15.95■□□□□ 0.14
Vopp1Q8R1C3 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC15.95■□□□□ 0.14
Vopp1Q8R1C3 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Vopp1Q8R1C3 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Vopp1Q8R1C3 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Vopp1Q8R1C3 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Vopp1Q8R1C3 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Vopp1Q8R1C3 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Vopp1Q8R1C3 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Vopp1Q8R1C3 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Vopp1Q8R1C3 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Vopp1Q8R1C3 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Vopp1Q8R1C3 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
Vopp1Q8R1C3 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Vopp1Q8R1C3 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Vopp1Q8R1C3 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Vopp1Q8R1C3 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC15.94■□□□□ 0.14
Vopp1Q8R1C3 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Vopp1Q8R1C3 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Vopp1Q8R1C3 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Vopp1Q8R1C3 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Vopp1Q8R1C3 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC15.94■□□□□ 0.14
Vopp1Q8R1C3 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Vopp1Q8R1C3 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Vopp1Q8R1C3 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Vopp1Q8R1C3 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Vopp1Q8R1C3 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Vopp1Q8R1C3 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC15.94■□□□□ 0.14
Vopp1Q8R1C3 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Vopp1Q8R1C3 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Vopp1Q8R1C3 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Vopp1Q8R1C3 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Vopp1Q8R1C3 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Vopp1Q8R1C3 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Vopp1Q8R1C3 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC15.93■□□□□ 0.14
Vopp1Q8R1C3 Gm15487-201ENSMUST00000122373 465 ntBASIC15.93■□□□□ 0.14
Vopp1Q8R1C3 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC15.93■□□□□ 0.14
Vopp1Q8R1C3 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC15.93■□□□□ 0.14
Vopp1Q8R1C3 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Vopp1Q8R1C3 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Vopp1Q8R1C3 Gm27437-201ENSMUST00000183429 107 ntBASIC15.93■□□□□ 0.14
Vopp1Q8R1C3 Gm37230-201ENSMUST00000194491 818 ntBASIC15.93■□□□□ 0.14
Vopp1Q8R1C3 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Vopp1Q8R1C3 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Vopp1Q8R1C3 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Vopp1Q8R1C3 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Vopp1Q8R1C3 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Vopp1Q8R1C3 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Vopp1Q8R1C3 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Vopp1Q8R1C3 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Vopp1Q8R1C3 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Vopp1Q8R1C3 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Vopp1Q8R1C3 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Vopp1Q8R1C3 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Vopp1Q8R1C3 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Vopp1Q8R1C3 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC15.92■□□□□ 0.14
Vopp1Q8R1C3 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Vopp1Q8R1C3 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vopp1Q8R1C3 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vopp1Q8R1C3 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vopp1Q8R1C3 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vopp1Q8R1C3 Gm14780-201ENSMUST00000118387 2737 ntBASIC15.92■□□□□ 0.14
Vopp1Q8R1C3 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vopp1Q8R1C3 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC15.92■□□□□ 0.14
Vopp1Q8R1C3 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Vopp1Q8R1C3 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vopp1Q8R1C3 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Vopp1Q8R1C3 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vopp1Q8R1C3 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC15.92■□□□□ 0.14
Vopp1Q8R1C3 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Vopp1Q8R1C3 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC15.92■□□□□ 0.14
Vopp1Q8R1C3 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vopp1Q8R1C3 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Vopp1Q8R1C3 Gm29310-201ENSMUST00000185468 696 ntBASIC15.92■□□□□ 0.14
Vopp1Q8R1C3 Gm21825-201ENSMUST00000185728 696 ntBASIC15.92■□□□□ 0.14
Vopp1Q8R1C3 Gm29109-201ENSMUST00000185895 696 ntBASIC15.92■□□□□ 0.14
Vopp1Q8R1C3 Gm21896-201ENSMUST00000186520 696 ntBASIC15.92■□□□□ 0.14
Vopp1Q8R1C3 Gm21873-201ENSMUST00000186728 696 ntBASIC15.92■□□□□ 0.14
Vopp1Q8R1C3 Gm21794-201ENSMUST00000187056 696 ntBASIC15.92■□□□□ 0.14
Vopp1Q8R1C3 Gm21880-201ENSMUST00000187275 696 ntBASIC15.92■□□□□ 0.14
Vopp1Q8R1C3 Gm21826-201ENSMUST00000187451 696 ntBASIC15.92■□□□□ 0.14
Vopp1Q8R1C3 Gm21198-201ENSMUST00000188393 696 ntBASIC15.92■□□□□ 0.14
Vopp1Q8R1C3 Gm21749-201ENSMUST00000189343 696 ntBASIC15.92■□□□□ 0.14
Vopp1Q8R1C3 Gm21901-201ENSMUST00000189568 696 ntBASIC15.92■□□□□ 0.14
Vopp1Q8R1C3 Gm29424-201ENSMUST00000189716 696 ntBASIC15.92■□□□□ 0.14
Vopp1Q8R1C3 Gm28599-201ENSMUST00000189838 694 ntBASIC15.92■□□□□ 0.14
Vopp1Q8R1C3 Gm21867-201ENSMUST00000189917 696 ntBASIC15.92■□□□□ 0.14
Vopp1Q8R1C3 Gm29269-201ENSMUST00000190087 696 ntBASIC15.92■□□□□ 0.14
Vopp1Q8R1C3 Gm21722-201ENSMUST00000190153 696 ntBASIC15.92■□□□□ 0.14
Vopp1Q8R1C3 Gm28423-201ENSMUST00000190701 696 ntBASIC15.92■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms