Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Sf3a1Q8K4Z5 Gm13294-201ENSMUST00000121757 1330 ntBASIC18.57■□□□□ 0.56
Sf3a1Q8K4Z5 AC119177.1-201ENSMUST00000227647 1332 ntBASIC18.57■□□□□ 0.56
Sf3a1Q8K4Z5 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sf3a1Q8K4Z5 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sf3a1Q8K4Z5 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Sf3a1Q8K4Z5 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sf3a1Q8K4Z5 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sf3a1Q8K4Z5 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC18.57■□□□□ 0.56
Sf3a1Q8K4Z5 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC18.57■□□□□ 0.56
Sf3a1Q8K4Z5 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Sf3a1Q8K4Z5 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sf3a1Q8K4Z5 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Sf3a1Q8K4Z5 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
Sf3a1Q8K4Z5 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sf3a1Q8K4Z5 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sf3a1Q8K4Z5 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
Sf3a1Q8K4Z5 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sf3a1Q8K4Z5 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sf3a1Q8K4Z5 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sf3a1Q8K4Z5 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sf3a1Q8K4Z5 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Sf3a1Q8K4Z5 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sf3a1Q8K4Z5 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sf3a1Q8K4Z5 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sf3a1Q8K4Z5 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sf3a1Q8K4Z5 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sf3a1Q8K4Z5 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Sf3a1Q8K4Z5 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sf3a1Q8K4Z5 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC18.56■□□□□ 0.56
Sf3a1Q8K4Z5 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sf3a1Q8K4Z5 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC18.56■□□□□ 0.56
Sf3a1Q8K4Z5 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC18.56■□□□□ 0.56
Sf3a1Q8K4Z5 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC18.56■□□□□ 0.56
Sf3a1Q8K4Z5 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sf3a1Q8K4Z5 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sf3a1Q8K4Z5 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sf3a1Q8K4Z5 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sf3a1Q8K4Z5 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sf3a1Q8K4Z5 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC18.55■□□□□ 0.56
Sf3a1Q8K4Z5 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sf3a1Q8K4Z5 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC18.55■□□□□ 0.56
Sf3a1Q8K4Z5 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sf3a1Q8K4Z5 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sf3a1Q8K4Z5 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sf3a1Q8K4Z5 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sf3a1Q8K4Z5 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Sf3a1Q8K4Z5 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sf3a1Q8K4Z5 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC18.55■□□□□ 0.56
Sf3a1Q8K4Z5 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC18.55■□□□□ 0.56
Sf3a1Q8K4Z5 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC18.55■□□□□ 0.56
Sf3a1Q8K4Z5 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Sf3a1Q8K4Z5 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC18.55■□□□□ 0.56
Sf3a1Q8K4Z5 Gm18246-201ENSMUST00000221023 728 ntBASIC18.55■□□□□ 0.56
Sf3a1Q8K4Z5 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC18.55■□□□□ 0.56
Sf3a1Q8K4Z5 CT009510.1-201ENSMUST00000227972 270 ntBASIC18.55■□□□□ 0.56
Sf3a1Q8K4Z5 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC18.55■□□□□ 0.56
Sf3a1Q8K4Z5 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sf3a1Q8K4Z5 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sf3a1Q8K4Z5 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sf3a1Q8K4Z5 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Sf3a1Q8K4Z5 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sf3a1Q8K4Z5 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Sf3a1Q8K4Z5 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sf3a1Q8K4Z5 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sf3a1Q8K4Z5 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sf3a1Q8K4Z5 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sf3a1Q8K4Z5 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sf3a1Q8K4Z5 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sf3a1Q8K4Z5 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sf3a1Q8K4Z5 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sf3a1Q8K4Z5 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Sf3a1Q8K4Z5 Gm27525-201ENSMUST00000184465 107 ntBASIC18.54■□□□□ 0.56
Sf3a1Q8K4Z5 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC18.54■□□□□ 0.56
Sf3a1Q8K4Z5 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sf3a1Q8K4Z5 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC18.54■□□□□ 0.56
Sf3a1Q8K4Z5 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Sf3a1Q8K4Z5 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sf3a1Q8K4Z5 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sf3a1Q8K4Z5 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sf3a1Q8K4Z5 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC18.54■□□□□ 0.56
Sf3a1Q8K4Z5 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sf3a1Q8K4Z5 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Sf3a1Q8K4Z5 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC18.54■□□□□ 0.56
Sf3a1Q8K4Z5 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sf3a1Q8K4Z5 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sf3a1Q8K4Z5 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sf3a1Q8K4Z5 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Sf3a1Q8K4Z5 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sf3a1Q8K4Z5 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC18.53■□□□□ 0.56
Sf3a1Q8K4Z5 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC18.53■□□□□ 0.56
Sf3a1Q8K4Z5 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sf3a1Q8K4Z5 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sf3a1Q8K4Z5 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sf3a1Q8K4Z5 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sf3a1Q8K4Z5 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Sf3a1Q8K4Z5 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sf3a1Q8K4Z5 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sf3a1Q8K4Z5 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Sf3a1Q8K4Z5 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC18.53■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms