Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Syne4Q8CII8 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Syne4Q8CII8 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Syne4Q8CII8 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Syne4Q8CII8 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Syne4Q8CII8 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Syne4Q8CII8 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Syne4Q8CII8 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Syne4Q8CII8 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Syne4Q8CII8 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Syne4Q8CII8 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Syne4Q8CII8 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Syne4Q8CII8 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Syne4Q8CII8 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC17.09■□□□□ 0.33
Syne4Q8CII8 Gm18187-201ENSMUST00000196476 984 ntBASIC17.09■□□□□ 0.33
Syne4Q8CII8 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC17.09■□□□□ 0.33
Syne4Q8CII8 AC164567.1-201ENSMUST00000219185 960 ntBASIC17.09■□□□□ 0.33
Syne4Q8CII8 AC132467.2-202ENSMUST00000227726 559 ntBASIC17.09■□□□□ 0.33
Syne4Q8CII8 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Syne4Q8CII8 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Syne4Q8CII8 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Syne4Q8CII8 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Syne4Q8CII8 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Syne4Q8CII8 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Syne4Q8CII8 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Syne4Q8CII8 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC17.09■□□□□ 0.33
Syne4Q8CII8 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Syne4Q8CII8 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Syne4Q8CII8 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC17.09■□□□□ 0.33
Syne4Q8CII8 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Syne4Q8CII8 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Syne4Q8CII8 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Syne4Q8CII8 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Syne4Q8CII8 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Syne4Q8CII8 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Syne4Q8CII8 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Syne4Q8CII8 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.33
Syne4Q8CII8 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Syne4Q8CII8 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Syne4Q8CII8 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Syne4Q8CII8 Gm24543-201ENSMUST00000103867 82 ntBASIC17.08■□□□□ 0.32
Syne4Q8CII8 Gm4204-201ENSMUST00000110798 1231 ntBASIC17.08■□□□□ 0.32
Syne4Q8CII8 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC17.08■□□□□ 0.32
Syne4Q8CII8 Gm12859-201ENSMUST00000117834 427 ntBASIC17.08■□□□□ 0.32
Syne4Q8CII8 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC17.08■□□□□ 0.32
Syne4Q8CII8 Gm15321-201ENSMUST00000121290 288 ntBASIC17.08■□□□□ 0.32
Syne4Q8CII8 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Syne4Q8CII8 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC17.08■□□□□ 0.32
Syne4Q8CII8 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Syne4Q8CII8 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC17.08■□□□□ 0.32
Syne4Q8CII8 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC17.08■□□□□ 0.32
Syne4Q8CII8 Gm6218-201ENSMUST00000219812 628 ntBASIC17.08■□□□□ 0.32
Syne4Q8CII8 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Syne4Q8CII8 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Syne4Q8CII8 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Syne4Q8CII8 Ntrk2-205ENSMUST00000224402 2284 ntBASIC17.08■□□□□ 0.32
Syne4Q8CII8 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Syne4Q8CII8 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Syne4Q8CII8 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Syne4Q8CII8 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
Syne4Q8CII8 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Syne4Q8CII8 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Syne4Q8CII8 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Syne4Q8CII8 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Syne4Q8CII8 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Syne4Q8CII8 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Syne4Q8CII8 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Syne4Q8CII8 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Syne4Q8CII8 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Syne4Q8CII8 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC17.07■□□□□ 0.32
Syne4Q8CII8 AC069562.2-201ENSMUST00000224644 2146 ntBASIC17.07■□□□□ 0.32
Syne4Q8CII8 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Syne4Q8CII8 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Syne4Q8CII8 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Syne4Q8CII8 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Syne4Q8CII8 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Syne4Q8CII8 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Syne4Q8CII8 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Syne4Q8CII8 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Syne4Q8CII8 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Syne4Q8CII8 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Syne4Q8CII8 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Syne4Q8CII8 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC17.06■□□□□ 0.32
Syne4Q8CII8 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Syne4Q8CII8 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
Syne4Q8CII8 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Syne4Q8CII8 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC17.06■□□□□ 0.32
Syne4Q8CII8 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Syne4Q8CII8 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
Syne4Q8CII8 Gm5566-201ENSMUST00000116118 459 ntBASIC17.06■□□□□ 0.32
Syne4Q8CII8 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Syne4Q8CII8 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC17.06■□□□□ 0.32
Syne4Q8CII8 Gm9719-201ENSMUST00000162765 543 ntBASIC17.06■□□□□ 0.32
Syne4Q8CII8 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Syne4Q8CII8 AL593843.1-201ENSMUST00000195891 145 ntBASIC17.06■□□□□ 0.32
Syne4Q8CII8 Shd-206ENSMUST00000225145 998 ntBASIC17.06■□□□□ 0.32
Syne4Q8CII8 AC090659.2-201ENSMUST00000225378 1186 ntBASIC17.06■□□□□ 0.32
Syne4Q8CII8 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Syne4Q8CII8 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Syne4Q8CII8 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms