Protein–RNA interactions for Protein: Q8CGW4

Sox30, Transcription factor SOX-30, mousemouse

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox30Q8CGW4 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sox30Q8CGW4 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sox30Q8CGW4 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Sox30Q8CGW4 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Sox30Q8CGW4 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC16.6■□□□□ 0.25
Sox30Q8CGW4 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sox30Q8CGW4 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sox30Q8CGW4 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC16.6■□□□□ 0.25
Sox30Q8CGW4 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sox30Q8CGW4 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sox30Q8CGW4 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sox30Q8CGW4 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sox30Q8CGW4 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sox30Q8CGW4 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sox30Q8CGW4 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC16.6■□□□□ 0.25
Sox30Q8CGW4 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Sox30Q8CGW4 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Sox30Q8CGW4 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sox30Q8CGW4 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Sox30Q8CGW4 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Sox30Q8CGW4 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC16.59■□□□□ 0.25
Sox30Q8CGW4 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Sox30Q8CGW4 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sox30Q8CGW4 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sox30Q8CGW4 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sox30Q8CGW4 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Sox30Q8CGW4 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sox30Q8CGW4 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Sox30Q8CGW4 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Sox30Q8CGW4 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sox30Q8CGW4 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sox30Q8CGW4 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sox30Q8CGW4 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC16.59■□□□□ 0.25
Sox30Q8CGW4 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC16.59■□□□□ 0.25
Sox30Q8CGW4 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
Sox30Q8CGW4 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sox30Q8CGW4 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Sox30Q8CGW4 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sox30Q8CGW4 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sox30Q8CGW4 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Sox30Q8CGW4 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sox30Q8CGW4 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC16.59■□□□□ 0.25
Sox30Q8CGW4 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sox30Q8CGW4 Gm43399-201ENSMUST00000202546 2374 ntBASIC16.58■□□□□ 0.25
Sox30Q8CGW4 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
Sox30Q8CGW4 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sox30Q8CGW4 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
Sox30Q8CGW4 AC164567.1-201ENSMUST00000219185 960 ntBASIC16.58■□□□□ 0.24
Sox30Q8CGW4 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC16.58■□□□□ 0.24
Sox30Q8CGW4 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Sox30Q8CGW4 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sox30Q8CGW4 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Sox30Q8CGW4 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sox30Q8CGW4 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sox30Q8CGW4 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sox30Q8CGW4 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC16.58■□□□□ 0.24
Sox30Q8CGW4 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sox30Q8CGW4 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sox30Q8CGW4 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Sox30Q8CGW4 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
Sox30Q8CGW4 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sox30Q8CGW4 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sox30Q8CGW4 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Sox30Q8CGW4 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sox30Q8CGW4 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Sox30Q8CGW4 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sox30Q8CGW4 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sox30Q8CGW4 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sox30Q8CGW4 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Sox30Q8CGW4 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC16.57■□□□□ 0.24
Sox30Q8CGW4 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC16.57■□□□□ 0.24
Sox30Q8CGW4 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sox30Q8CGW4 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
Sox30Q8CGW4 Gm11780-201ENSMUST00000136880 516 ntBASIC16.57■□□□□ 0.24
Sox30Q8CGW4 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC16.57■□□□□ 0.24
Sox30Q8CGW4 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC16.57■□□□□ 0.24
Sox30Q8CGW4 Gm2308-201ENSMUST00000166539 1004 ntBASIC16.57■□□□□ 0.24
Sox30Q8CGW4 Gm27704-201ENSMUST00000185094 107 ntBASIC16.57■□□□□ 0.24
Sox30Q8CGW4 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Sox30Q8CGW4 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC16.57■□□□□ 0.24
Sox30Q8CGW4 Gm6296-201ENSMUST00000222599 943 ntBASIC16.57■□□□□ 0.24
Sox30Q8CGW4 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sox30Q8CGW4 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sox30Q8CGW4 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sox30Q8CGW4 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Sox30Q8CGW4 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sox30Q8CGW4 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sox30Q8CGW4 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Sox30Q8CGW4 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC16.57■□□□□ 0.24
Sox30Q8CGW4 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sox30Q8CGW4 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sox30Q8CGW4 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Sox30Q8CGW4 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sox30Q8CGW4 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sox30Q8CGW4 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Sox30Q8CGW4 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sox30Q8CGW4 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sox30Q8CGW4 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sox30Q8CGW4 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sox30Q8CGW4 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms