Protein–RNA interactions for Protein: Q8CG47

Smc4, Structural maintenance of chromosomes protein 4, mousemouse

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc4Q8CG47 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC18.66■□□□□ 0.58
Smc4Q8CG47 Gm5628-201ENSMUST00000222318 1049 ntBASIC18.66■□□□□ 0.58
Smc4Q8CG47 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC18.66■□□□□ 0.58
Smc4Q8CG47 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smc4Q8CG47 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smc4Q8CG47 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smc4Q8CG47 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smc4Q8CG47 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
Smc4Q8CG47 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smc4Q8CG47 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Smc4Q8CG47 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smc4Q8CG47 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC18.66■□□□□ 0.58
Smc4Q8CG47 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Smc4Q8CG47 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smc4Q8CG47 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smc4Q8CG47 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Smc4Q8CG47 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smc4Q8CG47 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smc4Q8CG47 AC126250.1-201ENSMUST00000228343 1768 ntBASIC18.65■□□□□ 0.58
Smc4Q8CG47 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smc4Q8CG47 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smc4Q8CG47 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smc4Q8CG47 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Smc4Q8CG47 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
Smc4Q8CG47 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smc4Q8CG47 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC18.65■□□□□ 0.58
Smc4Q8CG47 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Smc4Q8CG47 Gm20553-201ENSMUST00000204205 844 ntBASIC18.65■□□□□ 0.58
Smc4Q8CG47 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC18.65■□□□□ 0.58
Smc4Q8CG47 CT025555.1-201ENSMUST00000225901 1217 ntBASIC18.65■□□□□ 0.58
Smc4Q8CG47 Gm8396-201ENSMUST00000057361 823 ntBASIC18.65■□□□□ 0.58
Smc4Q8CG47 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Smc4Q8CG47 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Smc4Q8CG47 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smc4Q8CG47 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Smc4Q8CG47 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smc4Q8CG47 Gm13332-201ENSMUST00000120451 1398 ntBASIC18.65■□□□□ 0.58
Smc4Q8CG47 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smc4Q8CG47 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC18.65■□□□□ 0.58
Smc4Q8CG47 AC093043.3-201ENSMUST00000226531 2273 ntBASIC18.65■□□□□ 0.58
Smc4Q8CG47 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smc4Q8CG47 Gm27528-202ENSMUST00000222916 2012 ntBASIC18.64■□□□□ 0.58
Smc4Q8CG47 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
Smc4Q8CG47 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Smc4Q8CG47 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Smc4Q8CG47 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Smc4Q8CG47 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC18.64■□□□□ 0.57
Smc4Q8CG47 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Smc4Q8CG47 Gm14701-201ENSMUST00000117156 348 ntBASIC18.64■□□□□ 0.57
Smc4Q8CG47 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC18.64■□□□□ 0.57
Smc4Q8CG47 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC18.64■□□□□ 0.57
Smc4Q8CG47 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
Smc4Q8CG47 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Smc4Q8CG47 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Smc4Q8CG47 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Smc4Q8CG47 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Smc4Q8CG47 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Smc4Q8CG47 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Smc4Q8CG47 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Smc4Q8CG47 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Smc4Q8CG47 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Smc4Q8CG47 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC18.64■□□□□ 0.57
Smc4Q8CG47 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Smc4Q8CG47 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Smc4Q8CG47 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Smc4Q8CG47 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
Smc4Q8CG47 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Smc4Q8CG47 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Smc4Q8CG47 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Smc4Q8CG47 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Smc4Q8CG47 Gm13365-201ENSMUST00000121188 973 ntBASIC18.63■□□□□ 0.57
Smc4Q8CG47 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC18.63■□□□□ 0.57
Smc4Q8CG47 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Smc4Q8CG47 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC18.63■□□□□ 0.57
Smc4Q8CG47 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Smc4Q8CG47 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Smc4Q8CG47 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Smc4Q8CG47 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Smc4Q8CG47 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Smc4Q8CG47 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smc4Q8CG47 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smc4Q8CG47 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smc4Q8CG47 Ccdc166-201ENSMUST00000182172 2584 ntBASIC18.62■□□□□ 0.57
Smc4Q8CG47 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smc4Q8CG47 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC18.62■□□□□ 0.57
Smc4Q8CG47 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC18.62■□□□□ 0.57
Smc4Q8CG47 Gm11745-201ENSMUST00000121669 448 ntBASIC18.62■□□□□ 0.57
Smc4Q8CG47 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Smc4Q8CG47 Gm16026-204ENSMUST00000162652 683 ntBASIC18.62■□□□□ 0.57
Smc4Q8CG47 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC18.62■□□□□ 0.57
Smc4Q8CG47 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Smc4Q8CG47 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smc4Q8CG47 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Smc4Q8CG47 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smc4Q8CG47 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smc4Q8CG47 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Smc4Q8CG47 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Smc4Q8CG47 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smc4Q8CG47 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
Smc4Q8CG47 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms