Protein–RNA interactions for Protein: Q8CDV4

Trim52, Tripartite motif-containing 52, mousemouse

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim52Q8CDV4 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC18.65■□□□□ 0.58
Trim52Q8CDV4 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim52Q8CDV4 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC18.65■□□□□ 0.58
Trim52Q8CDV4 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC18.65■□□□□ 0.58
Trim52Q8CDV4 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Trim52Q8CDV4 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim52Q8CDV4 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim52Q8CDV4 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Trim52Q8CDV4 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim52Q8CDV4 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim52Q8CDV4 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Trim52Q8CDV4 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim52Q8CDV4 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC18.65■□□□□ 0.58
Trim52Q8CDV4 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim52Q8CDV4 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim52Q8CDV4 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim52Q8CDV4 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
Trim52Q8CDV4 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC18.64■□□□□ 0.58
Trim52Q8CDV4 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
Trim52Q8CDV4 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC18.64■□□□□ 0.57
Trim52Q8CDV4 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
Trim52Q8CDV4 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Trim52Q8CDV4 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC18.64■□□□□ 0.57
Trim52Q8CDV4 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim52Q8CDV4 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Trim52Q8CDV4 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC18.64■□□□□ 0.57
Trim52Q8CDV4 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Trim52Q8CDV4 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Trim52Q8CDV4 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Trim52Q8CDV4 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC18.64■□□□□ 0.57
Trim52Q8CDV4 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim52Q8CDV4 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Trim52Q8CDV4 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Trim52Q8CDV4 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim52Q8CDV4 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Trim52Q8CDV4 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Trim52Q8CDV4 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Trim52Q8CDV4 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim52Q8CDV4 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Trim52Q8CDV4 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim52Q8CDV4 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Trim52Q8CDV4 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim52Q8CDV4 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Trim52Q8CDV4 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Trim52Q8CDV4 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
Trim52Q8CDV4 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim52Q8CDV4 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Trim52Q8CDV4 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC18.63■□□□□ 0.57
Trim52Q8CDV4 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Trim52Q8CDV4 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim52Q8CDV4 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim52Q8CDV4 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Trim52Q8CDV4 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Trim52Q8CDV4 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Trim52Q8CDV4 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Trim52Q8CDV4 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim52Q8CDV4 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Trim52Q8CDV4 Gm6539-201ENSMUST00000119157 1064 ntBASIC18.63■□□□□ 0.57
Trim52Q8CDV4 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC18.63■□□□□ 0.57
Trim52Q8CDV4 Gm5479-201ENSMUST00000160578 435 ntBASIC18.63■□□□□ 0.57
Trim52Q8CDV4 Gm25144-201ENSMUST00000179561 110 ntBASIC18.63■□□□□ 0.57
Trim52Q8CDV4 Gm25352-201ENSMUST00000179815 110 ntBASIC18.63■□□□□ 0.57
Trim52Q8CDV4 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Trim52Q8CDV4 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim52Q8CDV4 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Trim52Q8CDV4 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Trim52Q8CDV4 Gm44616-201ENSMUST00000206417 1732 ntBASIC18.63■□□□□ 0.57
Trim52Q8CDV4 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim52Q8CDV4 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim52Q8CDV4 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim52Q8CDV4 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim52Q8CDV4 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim52Q8CDV4 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim52Q8CDV4 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18.62■□□□□ 0.57
Trim52Q8CDV4 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Trim52Q8CDV4 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Trim52Q8CDV4 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim52Q8CDV4 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim52Q8CDV4 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Trim52Q8CDV4 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim52Q8CDV4 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Trim52Q8CDV4 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim52Q8CDV4 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Trim52Q8CDV4 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim52Q8CDV4 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim52Q8CDV4 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Trim52Q8CDV4 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim52Q8CDV4 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim52Q8CDV4 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Trim52Q8CDV4 Gm8410-201ENSMUST00000117225 605 ntBASIC18.61■□□□□ 0.57
Trim52Q8CDV4 Gm13453-201ENSMUST00000118708 357 ntBASIC18.61■□□□□ 0.57
Trim52Q8CDV4 Gm12151-201ENSMUST00000121374 290 ntBASIC18.61■□□□□ 0.57
Trim52Q8CDV4 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC18.61■□□□□ 0.57
Trim52Q8CDV4 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Trim52Q8CDV4 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim52Q8CDV4 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim52Q8CDV4 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim52Q8CDV4 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Trim52Q8CDV4 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim52Q8CDV4 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms