Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Lysmd4Q8CC84 Vti1a-206ENSMUST00000225529 1244 ntBASIC13.63□□□□□ -0.23
Lysmd4Q8CC84 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lysmd4Q8CC84 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
Lysmd4Q8CC84 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lysmd4Q8CC84 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Lysmd4Q8CC84 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Lysmd4Q8CC84 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC13.63□□□□□ -0.23
Lysmd4Q8CC84 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lysmd4Q8CC84 Celf4-206ENSMUST00000224553 1729 ntBASIC13.63□□□□□ -0.23
Lysmd4Q8CC84 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lysmd4Q8CC84 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lysmd4Q8CC84 Gm44291-201ENSMUST00000203102 2865 ntBASIC13.63□□□□□ -0.23
Lysmd4Q8CC84 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC13.63□□□□□ -0.23
Lysmd4Q8CC84 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Lysmd4Q8CC84 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lysmd4Q8CC84 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lysmd4Q8CC84 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lysmd4Q8CC84 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Lysmd4Q8CC84 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lysmd4Q8CC84 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Lysmd4Q8CC84 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lysmd4Q8CC84 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lysmd4Q8CC84 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lysmd4Q8CC84 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lysmd4Q8CC84 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lysmd4Q8CC84 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lysmd4Q8CC84 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lysmd4Q8CC84 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lysmd4Q8CC84 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC13.62□□□□□ -0.23
Lysmd4Q8CC84 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Lysmd4Q8CC84 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Lysmd4Q8CC84 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lysmd4Q8CC84 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Lysmd4Q8CC84 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC13.62□□□□□ -0.23
Lysmd4Q8CC84 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC13.62□□□□□ -0.23
Lysmd4Q8CC84 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lysmd4Q8CC84 Gm5587-201ENSMUST00000206270 674 ntBASIC13.62□□□□□ -0.23
Lysmd4Q8CC84 AC127349.1-201ENSMUST00000224590 266 ntBASIC13.62□□□□□ -0.23
Lysmd4Q8CC84 AC158538.2-201ENSMUST00000225455 906 ntBASIC13.62□□□□□ -0.23
Lysmd4Q8CC84 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Lysmd4Q8CC84 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lysmd4Q8CC84 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lysmd4Q8CC84 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lysmd4Q8CC84 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Lysmd4Q8CC84 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lysmd4Q8CC84 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Lysmd4Q8CC84 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Lysmd4Q8CC84 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Lysmd4Q8CC84 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Lysmd4Q8CC84 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC13.62□□□□□ -0.23
Lysmd4Q8CC84 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lysmd4Q8CC84 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lysmd4Q8CC84 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Lysmd4Q8CC84 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lysmd4Q8CC84 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lysmd4Q8CC84 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Lysmd4Q8CC84 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lysmd4Q8CC84 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC13.62□□□□□ -0.23
Lysmd4Q8CC84 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lysmd4Q8CC84 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Lysmd4Q8CC84 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Lysmd4Q8CC84 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Lysmd4Q8CC84 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lysmd4Q8CC84 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lysmd4Q8CC84 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC13.61□□□□□ -0.23
Lysmd4Q8CC84 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lysmd4Q8CC84 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lysmd4Q8CC84 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lysmd4Q8CC84 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lysmd4Q8CC84 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lysmd4Q8CC84 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Lysmd4Q8CC84 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lysmd4Q8CC84 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lysmd4Q8CC84 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Lysmd4Q8CC84 Gm15794-201ENSMUST00000120182 631 ntBASIC13.61□□□□□ -0.23
Lysmd4Q8CC84 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC13.61□□□□□ -0.23
Lysmd4Q8CC84 AC153794.1-201ENSMUST00000169148 126 ntBASIC13.61□□□□□ -0.23
Lysmd4Q8CC84 Gm6345-202ENSMUST00000180900 204 ntBASIC13.61□□□□□ -0.23
Lysmd4Q8CC84 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lysmd4Q8CC84 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC13.61□□□□□ -0.23
Lysmd4Q8CC84 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lysmd4Q8CC84 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lysmd4Q8CC84 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lysmd4Q8CC84 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lysmd4Q8CC84 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lysmd4Q8CC84 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC13.61□□□□□ -0.23
Lysmd4Q8CC84 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lysmd4Q8CC84 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Lysmd4Q8CC84 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lysmd4Q8CC84 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lysmd4Q8CC84 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lysmd4Q8CC84 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Lysmd4Q8CC84 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lysmd4Q8CC84 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC13.6□□□□□ -0.23
Lysmd4Q8CC84 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Lysmd4Q8CC84 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC13.6□□□□□ -0.23
Lysmd4Q8CC84 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Lysmd4Q8CC84 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Lysmd4Q8CC84 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms