Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sh3rf2Q8BZT2 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC15.35■□□□□ 0.05
Sh3rf2Q8BZT2 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sh3rf2Q8BZT2 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sh3rf2Q8BZT2 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sh3rf2Q8BZT2 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC15.35■□□□□ 0.05
Sh3rf2Q8BZT2 Gm12017-201ENSMUST00000122453 1003 ntBASIC15.35■□□□□ 0.05
Sh3rf2Q8BZT2 Gm44872-201ENSMUST00000207864 420 ntBASIC15.35■□□□□ 0.05
Sh3rf2Q8BZT2 CT030684.1-201ENSMUST00000227292 914 ntBASIC15.35■□□□□ 0.05
Sh3rf2Q8BZT2 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sh3rf2Q8BZT2 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sh3rf2Q8BZT2 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC15.35■□□□□ 0.05
Sh3rf2Q8BZT2 Gm6018-201ENSMUST00000216090 1306 ntBASIC15.35■□□□□ 0.05
Sh3rf2Q8BZT2 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sh3rf2Q8BZT2 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sh3rf2Q8BZT2 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sh3rf2Q8BZT2 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sh3rf2Q8BZT2 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sh3rf2Q8BZT2 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
Sh3rf2Q8BZT2 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC15.35■□□□□ 0.05
Sh3rf2Q8BZT2 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sh3rf2Q8BZT2 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC15.34■□□□□ 0.05
Sh3rf2Q8BZT2 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sh3rf2Q8BZT2 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sh3rf2Q8BZT2 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sh3rf2Q8BZT2 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sh3rf2Q8BZT2 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sh3rf2Q8BZT2 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sh3rf2Q8BZT2 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sh3rf2Q8BZT2 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sh3rf2Q8BZT2 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
Sh3rf2Q8BZT2 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Sh3rf2Q8BZT2 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sh3rf2Q8BZT2 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Sh3rf2Q8BZT2 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sh3rf2Q8BZT2 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC15.34■□□□□ 0.05
Sh3rf2Q8BZT2 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC15.34■□□□□ 0.05
Sh3rf2Q8BZT2 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Sh3rf2Q8BZT2 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC15.34■□□□□ 0.05
Sh3rf2Q8BZT2 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC15.34■□□□□ 0.05
Sh3rf2Q8BZT2 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sh3rf2Q8BZT2 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC15.34■□□□□ 0.05
Sh3rf2Q8BZT2 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Sh3rf2Q8BZT2 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sh3rf2Q8BZT2 Ptprs-211ENSMUST00000223859 5588 ntBASIC15.34■□□□□ 0.05
Sh3rf2Q8BZT2 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sh3rf2Q8BZT2 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sh3rf2Q8BZT2 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sh3rf2Q8BZT2 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sh3rf2Q8BZT2 CT025626.1-201ENSMUST00000223735 1455 ntBASIC15.33■□□□□ 0.05
Sh3rf2Q8BZT2 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Sh3rf2Q8BZT2 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
Sh3rf2Q8BZT2 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Sh3rf2Q8BZT2 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
Sh3rf2Q8BZT2 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC15.33■□□□□ 0.05
Sh3rf2Q8BZT2 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC15.33■□□□□ 0.05
Sh3rf2Q8BZT2 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC15.33■□□□□ 0.05
Sh3rf2Q8BZT2 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sh3rf2Q8BZT2 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Sh3rf2Q8BZT2 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Sh3rf2Q8BZT2 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Sh3rf2Q8BZT2 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC15.33■□□□□ 0.04
Sh3rf2Q8BZT2 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Sh3rf2Q8BZT2 AC140397.2-201ENSMUST00000224213 834 ntBASIC15.33■□□□□ 0.04
Sh3rf2Q8BZT2 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sh3rf2Q8BZT2 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sh3rf2Q8BZT2 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Sh3rf2Q8BZT2 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sh3rf2Q8BZT2 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC15.33■□□□□ 0.04
Sh3rf2Q8BZT2 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sh3rf2Q8BZT2 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sh3rf2Q8BZT2 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sh3rf2Q8BZT2 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Sh3rf2Q8BZT2 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC15.33■□□□□ 0.04
Sh3rf2Q8BZT2 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sh3rf2Q8BZT2 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC15.32■□□□□ 0.04
Sh3rf2Q8BZT2 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Sh3rf2Q8BZT2 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Sh3rf2Q8BZT2 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
Sh3rf2Q8BZT2 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC15.32■□□□□ 0.04
Sh3rf2Q8BZT2 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC15.32■□□□□ 0.04
Sh3rf2Q8BZT2 Gm16026-204ENSMUST00000162652 683 ntBASIC15.32■□□□□ 0.04
Sh3rf2Q8BZT2 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sh3rf2Q8BZT2 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC15.32■□□□□ 0.04
Sh3rf2Q8BZT2 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC15.32■□□□□ 0.04
Sh3rf2Q8BZT2 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC15.32■□□□□ 0.04
Sh3rf2Q8BZT2 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC15.32■□□□□ 0.04
Sh3rf2Q8BZT2 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC15.32■□□□□ 0.04
Sh3rf2Q8BZT2 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Sh3rf2Q8BZT2 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC15.32■□□□□ 0.04
Sh3rf2Q8BZT2 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Sh3rf2Q8BZT2 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sh3rf2Q8BZT2 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sh3rf2Q8BZT2 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Sh3rf2Q8BZT2 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Sh3rf2Q8BZT2 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sh3rf2Q8BZT2 AC133083.1-201ENSMUST00000221736 2209 ntBASIC15.32■□□□□ 0.04
Sh3rf2Q8BZT2 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Sh3rf2Q8BZT2 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sh3rf2Q8BZT2 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms