Protein–RNA interactions for Protein: Q8BTV2

Cpsf7, Cleavage and polyadenylation specificity factor subunit 7, mousemouse

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf7Q8BTV2 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cpsf7Q8BTV2 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cpsf7Q8BTV2 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cpsf7Q8BTV2 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Cpsf7Q8BTV2 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Cpsf7Q8BTV2 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cpsf7Q8BTV2 AC162938.1-201ENSMUST00000213140 2323 ntBASIC15.22■□□□□ 0.03
Cpsf7Q8BTV2 Ptprs-211ENSMUST00000223859 5588 ntBASIC15.22■□□□□ 0.03
Cpsf7Q8BTV2 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cpsf7Q8BTV2 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Cpsf7Q8BTV2 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC15.22■□□□□ 0.03
Cpsf7Q8BTV2 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cpsf7Q8BTV2 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cpsf7Q8BTV2 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cpsf7Q8BTV2 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cpsf7Q8BTV2 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Cpsf7Q8BTV2 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cpsf7Q8BTV2 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cpsf7Q8BTV2 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Cpsf7Q8BTV2 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cpsf7Q8BTV2 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
Cpsf7Q8BTV2 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC15.21■□□□□ 0.03
Cpsf7Q8BTV2 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cpsf7Q8BTV2 Gm9856-201ENSMUST00000217077 2578 ntBASIC15.21■□□□□ 0.03
Cpsf7Q8BTV2 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cpsf7Q8BTV2 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cpsf7Q8BTV2 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Cpsf7Q8BTV2 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cpsf7Q8BTV2 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cpsf7Q8BTV2 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Cpsf7Q8BTV2 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Cpsf7Q8BTV2 Gm6623-201ENSMUST00000173570 544 ntBASIC15.21■□□□□ 0.03
Cpsf7Q8BTV2 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC15.21■□□□□ 0.03
Cpsf7Q8BTV2 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cpsf7Q8BTV2 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Cpsf7Q8BTV2 Gm27704-201ENSMUST00000185094 107 ntBASIC15.21■□□□□ 0.03
Cpsf7Q8BTV2 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cpsf7Q8BTV2 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Cpsf7Q8BTV2 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cpsf7Q8BTV2 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cpsf7Q8BTV2 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cpsf7Q8BTV2 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cpsf7Q8BTV2 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cpsf7Q8BTV2 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cpsf7Q8BTV2 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cpsf7Q8BTV2 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cpsf7Q8BTV2 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC15.21■□□□□ 0.03
Cpsf7Q8BTV2 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cpsf7Q8BTV2 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Cpsf7Q8BTV2 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cpsf7Q8BTV2 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Cpsf7Q8BTV2 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Cpsf7Q8BTV2 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Cpsf7Q8BTV2 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
Cpsf7Q8BTV2 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Cpsf7Q8BTV2 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Cpsf7Q8BTV2 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Cpsf7Q8BTV2 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Cpsf7Q8BTV2 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Cpsf7Q8BTV2 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cpsf7Q8BTV2 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cpsf7Q8BTV2 Gm21451-201ENSMUST00000111062 2775 ntBASIC15.2■□□□□ 0.02
Cpsf7Q8BTV2 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cpsf7Q8BTV2 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cpsf7Q8BTV2 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cpsf7Q8BTV2 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cpsf7Q8BTV2 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
Cpsf7Q8BTV2 Gm11950-201ENSMUST00000121615 838 ntBASIC15.2■□□□□ 0.02
Cpsf7Q8BTV2 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cpsf7Q8BTV2 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cpsf7Q8BTV2 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Cpsf7Q8BTV2 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cpsf7Q8BTV2 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cpsf7Q8BTV2 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cpsf7Q8BTV2 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cpsf7Q8BTV2 Nupl1-207ENSMUST00000225311 2475 ntBASIC15.2■□□□□ 0.02
Cpsf7Q8BTV2 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC15.2■□□□□ 0.02
Cpsf7Q8BTV2 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cpsf7Q8BTV2 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cpsf7Q8BTV2 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Cpsf7Q8BTV2 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Cpsf7Q8BTV2 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cpsf7Q8BTV2 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC15.19■□□□□ 0.02
Cpsf7Q8BTV2 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
Cpsf7Q8BTV2 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Cpsf7Q8BTV2 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cpsf7Q8BTV2 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC15.19■□□□□ 0.02
Cpsf7Q8BTV2 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Cpsf7Q8BTV2 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC15.19■□□□□ 0.02
Cpsf7Q8BTV2 Gm12008-201ENSMUST00000117791 755 ntBASIC15.19■□□□□ 0.02
Cpsf7Q8BTV2 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC15.19■□□□□ 0.02
Cpsf7Q8BTV2 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC15.19■□□□□ 0.02
Cpsf7Q8BTV2 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Cpsf7Q8BTV2 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cpsf7Q8BTV2 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cpsf7Q8BTV2 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Cpsf7Q8BTV2 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cpsf7Q8BTV2 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC15.19■□□□□ 0.02
Cpsf7Q8BTV2 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Cpsf7Q8BTV2 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms