Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smco3Q8BQM7 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smco3Q8BQM7 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smco3Q8BQM7 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smco3Q8BQM7 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smco3Q8BQM7 Gm16061-201ENSMUST00000122167 857 ntBASIC12.54□□□□□ -0.4
Smco3Q8BQM7 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Smco3Q8BQM7 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smco3Q8BQM7 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Smco3Q8BQM7 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC12.54□□□□□ -0.4
Smco3Q8BQM7 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smco3Q8BQM7 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smco3Q8BQM7 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smco3Q8BQM7 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smco3Q8BQM7 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smco3Q8BQM7 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Smco3Q8BQM7 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smco3Q8BQM7 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smco3Q8BQM7 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smco3Q8BQM7 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smco3Q8BQM7 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smco3Q8BQM7 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Smco3Q8BQM7 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC12.54□□□□□ -0.4
Smco3Q8BQM7 Gm11839-201ENSMUST00000120647 1953 ntBASIC12.54□□□□□ -0.4
Smco3Q8BQM7 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC12.54□□□□□ -0.4
Smco3Q8BQM7 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smco3Q8BQM7 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smco3Q8BQM7 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smco3Q8BQM7 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Smco3Q8BQM7 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smco3Q8BQM7 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Smco3Q8BQM7 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smco3Q8BQM7 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smco3Q8BQM7 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smco3Q8BQM7 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smco3Q8BQM7 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Smco3Q8BQM7 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smco3Q8BQM7 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Smco3Q8BQM7 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smco3Q8BQM7 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Smco3Q8BQM7 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Smco3Q8BQM7 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smco3Q8BQM7 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smco3Q8BQM7 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smco3Q8BQM7 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Smco3Q8BQM7 Gm13168-201ENSMUST00000121771 632 ntBASIC12.53□□□□□ -0.4
Smco3Q8BQM7 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smco3Q8BQM7 Gm2274-201ENSMUST00000184539 609 ntBASIC12.53□□□□□ -0.4
Smco3Q8BQM7 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smco3Q8BQM7 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smco3Q8BQM7 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Smco3Q8BQM7 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC12.53□□□□□ -0.4
Smco3Q8BQM7 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smco3Q8BQM7 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Smco3Q8BQM7 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Smco3Q8BQM7 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smco3Q8BQM7 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Smco3Q8BQM7 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smco3Q8BQM7 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smco3Q8BQM7 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
Smco3Q8BQM7 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smco3Q8BQM7 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smco3Q8BQM7 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smco3Q8BQM7 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Smco3Q8BQM7 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smco3Q8BQM7 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Smco3Q8BQM7 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smco3Q8BQM7 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smco3Q8BQM7 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Smco3Q8BQM7 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smco3Q8BQM7 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smco3Q8BQM7 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smco3Q8BQM7 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Smco3Q8BQM7 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Smco3Q8BQM7 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Smco3Q8BQM7 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Smco3Q8BQM7 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Smco3Q8BQM7 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Smco3Q8BQM7 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Smco3Q8BQM7 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Smco3Q8BQM7 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Smco3Q8BQM7 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Smco3Q8BQM7 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.41
Smco3Q8BQM7 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Smco3Q8BQM7 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Smco3Q8BQM7 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
Smco3Q8BQM7 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Smco3Q8BQM7 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Smco3Q8BQM7 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
Smco3Q8BQM7 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Smco3Q8BQM7 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Smco3Q8BQM7 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC12.52□□□□□ -0.41
Smco3Q8BQM7 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Smco3Q8BQM7 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Smco3Q8BQM7 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Smco3Q8BQM7 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Smco3Q8BQM7 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Smco3Q8BQM7 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Smco3Q8BQM7 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Smco3Q8BQM7 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms