Protein–RNA interactions for Protein: Q8BMK4

Ckap4, Cytoskeleton-associated protein 4, mousemouse

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4Q8BMK4 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
Ckap4Q8BMK4 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ckap4Q8BMK4 Gm25406-201ENSMUST00000157599 105 ntBASIC14.4□□□□□ -0.1
Ckap4Q8BMK4 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Ckap4Q8BMK4 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC14.4□□□□□ -0.1
Ckap4Q8BMK4 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ckap4Q8BMK4 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ckap4Q8BMK4 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ckap4Q8BMK4 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ckap4Q8BMK4 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ckap4Q8BMK4 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ckap4Q8BMK4 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ckap4Q8BMK4 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ckap4Q8BMK4 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ckap4Q8BMK4 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Ckap4Q8BMK4 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ckap4Q8BMK4 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Ckap4Q8BMK4 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC14.4□□□□□ -0.1
Ckap4Q8BMK4 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ckap4Q8BMK4 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ckap4Q8BMK4 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ckap4Q8BMK4 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Ckap4Q8BMK4 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC14.39□□□□□ -0.11
Ckap4Q8BMK4 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ckap4Q8BMK4 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ckap4Q8BMK4 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ckap4Q8BMK4 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ckap4Q8BMK4 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ckap4Q8BMK4 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ckap4Q8BMK4 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Ckap4Q8BMK4 Gm15165-201ENSMUST00000118140 502 ntBASIC14.39□□□□□ -0.11
Ckap4Q8BMK4 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC14.39□□□□□ -0.11
Ckap4Q8BMK4 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC14.39□□□□□ -0.11
Ckap4Q8BMK4 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC14.39□□□□□ -0.11
Ckap4Q8BMK4 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC14.39□□□□□ -0.11
Ckap4Q8BMK4 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
Ckap4Q8BMK4 Gm21362-201ENSMUST00000194272 928 ntBASIC14.39□□□□□ -0.11
Ckap4Q8BMK4 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ckap4Q8BMK4 Gm9172-201ENSMUST00000212092 954 ntBASIC14.39□□□□□ -0.11
Ckap4Q8BMK4 AC153889.1-201ENSMUST00000219257 330 ntBASIC14.39□□□□□ -0.11
Ckap4Q8BMK4 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ckap4Q8BMK4 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ckap4Q8BMK4 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ckap4Q8BMK4 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ckap4Q8BMK4 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Ckap4Q8BMK4 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ckap4Q8BMK4 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ckap4Q8BMK4 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Ckap4Q8BMK4 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ckap4Q8BMK4 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ckap4Q8BMK4 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ckap4Q8BMK4 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ckap4Q8BMK4 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ckap4Q8BMK4 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ckap4Q8BMK4 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ckap4Q8BMK4 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC14.38□□□□□ -0.11
Ckap4Q8BMK4 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ckap4Q8BMK4 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ckap4Q8BMK4 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Ckap4Q8BMK4 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ckap4Q8BMK4 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC14.38□□□□□ -0.11
Ckap4Q8BMK4 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ckap4Q8BMK4 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ckap4Q8BMK4 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ckap4Q8BMK4 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ckap4Q8BMK4 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC14.38□□□□□ -0.11
Ckap4Q8BMK4 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ckap4Q8BMK4 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC14.38□□□□□ -0.11
Ckap4Q8BMK4 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC14.38□□□□□ -0.11
Ckap4Q8BMK4 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC14.38□□□□□ -0.11
Ckap4Q8BMK4 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ckap4Q8BMK4 AC124569.2-201ENSMUST00000225998 818 ntBASIC14.38□□□□□ -0.11
Ckap4Q8BMK4 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ckap4Q8BMK4 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ckap4Q8BMK4 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ckap4Q8BMK4 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ckap4Q8BMK4 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ckap4Q8BMK4 Sorbs3-204ENSMUST00000227929 2460 ntBASIC14.38□□□□□ -0.11
Ckap4Q8BMK4 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ckap4Q8BMK4 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC14.38□□□□□ -0.11
Ckap4Q8BMK4 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Ckap4Q8BMK4 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ckap4Q8BMK4 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ckap4Q8BMK4 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Ckap4Q8BMK4 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ckap4Q8BMK4 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ckap4Q8BMK4 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ckap4Q8BMK4 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ckap4Q8BMK4 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ckap4Q8BMK4 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ckap4Q8BMK4 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ckap4Q8BMK4 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ckap4Q8BMK4 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ckap4Q8BMK4 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC14.37□□□□□ -0.11
Ckap4Q8BMK4 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ckap4Q8BMK4 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Ckap4Q8BMK4 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ckap4Q8BMK4 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ckap4Q8BMK4 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC14.37□□□□□ -0.11
Ckap4Q8BMK4 Gm15372-201ENSMUST00000120729 834 ntBASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms