Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Col16a1Q8BLX7 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Col16a1Q8BLX7 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Col16a1Q8BLX7 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Col16a1Q8BLX7 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Col16a1Q8BLX7 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC19.66■□□□□ 0.74
Col16a1Q8BLX7 Gm12091-201ENSMUST00000146791 830 ntBASIC19.66■□□□□ 0.74
Col16a1Q8BLX7 Gm8602-201ENSMUST00000184045 607 ntBASIC19.66■□□□□ 0.74
Col16a1Q8BLX7 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Col16a1Q8BLX7 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Col16a1Q8BLX7 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Col16a1Q8BLX7 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Col16a1Q8BLX7 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Col16a1Q8BLX7 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Col16a1Q8BLX7 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Col16a1Q8BLX7 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Col16a1Q8BLX7 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
Col16a1Q8BLX7 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Col16a1Q8BLX7 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Col16a1Q8BLX7 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Col16a1Q8BLX7 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Col16a1Q8BLX7 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
Col16a1Q8BLX7 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Col16a1Q8BLX7 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Col16a1Q8BLX7 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Col16a1Q8BLX7 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Col16a1Q8BLX7 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Col16a1Q8BLX7 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Col16a1Q8BLX7 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC19.66■□□□□ 0.74
Col16a1Q8BLX7 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Col16a1Q8BLX7 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Col16a1Q8BLX7 Gm27631-201ENSMUST00000184163 466 ntBASIC19.66■□□□□ 0.74
Col16a1Q8BLX7 Gm37230-201ENSMUST00000194491 818 ntBASIC19.66■□□□□ 0.74
Col16a1Q8BLX7 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Col16a1Q8BLX7 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Col16a1Q8BLX7 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Col16a1Q8BLX7 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Col16a1Q8BLX7 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Col16a1Q8BLX7 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Col16a1Q8BLX7 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Col16a1Q8BLX7 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Col16a1Q8BLX7 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Col16a1Q8BLX7 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Col16a1Q8BLX7 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC19.65■□□□□ 0.74
Col16a1Q8BLX7 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Col16a1Q8BLX7 Olfr286-202ENSMUST00000205305 969 ntBASIC19.65■□□□□ 0.74
Col16a1Q8BLX7 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC19.65■□□□□ 0.74
Col16a1Q8BLX7 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Col16a1Q8BLX7 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Col16a1Q8BLX7 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Col16a1Q8BLX7 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Col16a1Q8BLX7 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC19.65■□□□□ 0.74
Col16a1Q8BLX7 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Col16a1Q8BLX7 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Col16a1Q8BLX7 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Col16a1Q8BLX7 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC19.64■□□□□ 0.74
Col16a1Q8BLX7 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Col16a1Q8BLX7 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Col16a1Q8BLX7 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
Col16a1Q8BLX7 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Col16a1Q8BLX7 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Col16a1Q8BLX7 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Col16a1Q8BLX7 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Col16a1Q8BLX7 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Col16a1Q8BLX7 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Col16a1Q8BLX7 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Col16a1Q8BLX7 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Col16a1Q8BLX7 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Col16a1Q8BLX7 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Col16a1Q8BLX7 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Col16a1Q8BLX7 Gm13829-201ENSMUST00000119600 138 ntBASIC19.63■□□□□ 0.73
Col16a1Q8BLX7 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Col16a1Q8BLX7 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC19.63■□□□□ 0.73
Col16a1Q8BLX7 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC19.63■□□□□ 0.73
Col16a1Q8BLX7 Gm18624-201ENSMUST00000220966 658 ntBASIC19.63■□□□□ 0.73
Col16a1Q8BLX7 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Col16a1Q8BLX7 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
Col16a1Q8BLX7 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Col16a1Q8BLX7 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Col16a1Q8BLX7 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Col16a1Q8BLX7 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Col16a1Q8BLX7 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Col16a1Q8BLX7 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Col16a1Q8BLX7 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Col16a1Q8BLX7 Gm37917-201ENSMUST00000194711 392 ntBASIC19.62■□□□□ 0.73
Col16a1Q8BLX7 Gm18062-201ENSMUST00000208020 547 ntBASIC19.62■□□□□ 0.73
Col16a1Q8BLX7 Gm18055-201ENSMUST00000208254 547 ntBASIC19.62■□□□□ 0.73
Col16a1Q8BLX7 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Col16a1Q8BLX7 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Col16a1Q8BLX7 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Col16a1Q8BLX7 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Col16a1Q8BLX7 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Col16a1Q8BLX7 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Col16a1Q8BLX7 Ccdc166-201ENSMUST00000182172 2584 ntBASIC19.62■□□□□ 0.73
Col16a1Q8BLX7 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Col16a1Q8BLX7 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Col16a1Q8BLX7 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Col16a1Q8BLX7 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Col16a1Q8BLX7 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Col16a1Q8BLX7 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms