Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Gm27867-201ENSMUST00000184778 125 ntBASIC15.58■□□□□ 0.08
Chmp2bQ8BJF9 Mir7071-201ENSMUST00000184847 69 ntBASIC15.58■□□□□ 0.08
Chmp2bQ8BJF9 Gm19164-201ENSMUST00000210667 640 ntBASIC15.58■□□□□ 0.08
Chmp2bQ8BJF9 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Chmp2bQ8BJF9 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC15.58■□□□□ 0.08
Chmp2bQ8BJF9 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Chmp2bQ8BJF9 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Chmp2bQ8BJF9 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Chmp2bQ8BJF9 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Chmp2bQ8BJF9 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Chmp2bQ8BJF9 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Chmp2bQ8BJF9 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC15.58■□□□□ 0.08
Chmp2bQ8BJF9 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Chmp2bQ8BJF9 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Chmp2bQ8BJF9 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Chmp2bQ8BJF9 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Chmp2bQ8BJF9 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC15.57■□□□□ 0.08
Chmp2bQ8BJF9 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Chmp2bQ8BJF9 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
Chmp2bQ8BJF9 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Chmp2bQ8BJF9 Gm45760-201ENSMUST00000212190 1782 ntBASIC15.57■□□□□ 0.08
Chmp2bQ8BJF9 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Chmp2bQ8BJF9 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Chmp2bQ8BJF9 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Chmp2bQ8BJF9 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC15.57■□□□□ 0.08
Chmp2bQ8BJF9 Gm14722-201ENSMUST00000118943 689 ntBASIC15.57■□□□□ 0.08
Chmp2bQ8BJF9 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC15.57■□□□□ 0.08
Chmp2bQ8BJF9 AC159093.1-201ENSMUST00000227779 380 ntBASIC15.57■□□□□ 0.08
Chmp2bQ8BJF9 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Chmp2bQ8BJF9 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Chmp2bQ8BJF9 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Chmp2bQ8BJF9 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Chmp2bQ8BJF9 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Chmp2bQ8BJF9 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Chmp2bQ8BJF9 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Chmp2bQ8BJF9 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Chmp2bQ8BJF9 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Chmp2bQ8BJF9 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC15.57■□□□□ 0.08
Chmp2bQ8BJF9 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Chmp2bQ8BJF9 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC15.56■□□□□ 0.08
Chmp2bQ8BJF9 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Chmp2bQ8BJF9 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Chmp2bQ8BJF9 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Chmp2bQ8BJF9 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Chmp2bQ8BJF9 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
Chmp2bQ8BJF9 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Chmp2bQ8BJF9 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Chmp2bQ8BJF9 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC15.56■□□□□ 0.08
Chmp2bQ8BJF9 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC15.56■□□□□ 0.08
Chmp2bQ8BJF9 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC15.56■□□□□ 0.08
Chmp2bQ8BJF9 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC15.56■□□□□ 0.08
Chmp2bQ8BJF9 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Chmp2bQ8BJF9 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Chmp2bQ8BJF9 Gm18622-201ENSMUST00000219361 595 ntBASIC15.56■□□□□ 0.08
Chmp2bQ8BJF9 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Chmp2bQ8BJF9 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Chmp2bQ8BJF9 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Chmp2bQ8BJF9 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Chmp2bQ8BJF9 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Chmp2bQ8BJF9 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
Chmp2bQ8BJF9 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Chmp2bQ8BJF9 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Chmp2bQ8BJF9 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Chmp2bQ8BJF9 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Chmp2bQ8BJF9 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
Chmp2bQ8BJF9 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Chmp2bQ8BJF9 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Chmp2bQ8BJF9 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Chmp2bQ8BJF9 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Chmp2bQ8BJF9 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Chmp2bQ8BJF9 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC15.55■□□□□ 0.08
Chmp2bQ8BJF9 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Chmp2bQ8BJF9 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Chmp2bQ8BJF9 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Chmp2bQ8BJF9 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Chmp2bQ8BJF9 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Chmp2bQ8BJF9 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Chmp2bQ8BJF9 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Chmp2bQ8BJF9 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC15.55■□□□□ 0.08
Chmp2bQ8BJF9 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
Chmp2bQ8BJF9 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC15.55■□□□□ 0.08
Chmp2bQ8BJF9 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC15.55■□□□□ 0.08
Chmp2bQ8BJF9 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Chmp2bQ8BJF9 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Chmp2bQ8BJF9 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Chmp2bQ8BJF9 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Chmp2bQ8BJF9 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Chmp2bQ8BJF9 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Chmp2bQ8BJF9 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Chmp2bQ8BJF9 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Chmp2bQ8BJF9 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Chmp2bQ8BJF9 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Chmp2bQ8BJF9 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Chmp2bQ8BJF9 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Chmp2bQ8BJF9 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Chmp2bQ8BJF9 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC15.54■□□□□ 0.08
Chmp2bQ8BJF9 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC15.54■□□□□ 0.08
Chmp2bQ8BJF9 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Chmp2bQ8BJF9 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Chmp2bQ8BJF9 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms