Protein–RNA interactions for Protein: Q80TT8

Cul9, Cullin-9, mousemouse

Predictions only

Length 1,865 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cul9Q80TT8 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Cul9Q80TT8 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC21.36■■□□□ 1.01
Cul9Q80TT8 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
Cul9Q80TT8 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Cul9Q80TT8 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC21.36■■□□□ 1.01
Cul9Q80TT8 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Cul9Q80TT8 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Cul9Q80TT8 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Cul9Q80TT8 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Cul9Q80TT8 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Cul9Q80TT8 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC21.35■■□□□ 1.01
Cul9Q80TT8 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Cul9Q80TT8 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC21.35■■□□□ 1.01
Cul9Q80TT8 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC21.35■■□□□ 1.01
Cul9Q80TT8 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Cul9Q80TT8 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Cul9Q80TT8 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Cul9Q80TT8 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
Cul9Q80TT8 Ntrk2-205ENSMUST00000224402 2284 ntBASIC21.35■■□□□ 1.01
Cul9Q80TT8 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Cul9Q80TT8 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Cul9Q80TT8 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC21.35■■□□□ 1.01
Cul9Q80TT8 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC21.35■■□□□ 1.01
Cul9Q80TT8 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Cul9Q80TT8 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Cul9Q80TT8 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Cul9Q80TT8 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Cul9Q80TT8 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Cul9Q80TT8 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Cul9Q80TT8 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Cul9Q80TT8 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Cul9Q80TT8 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Cul9Q80TT8 Gm15635-204ENSMUST00000208024 2539 ntBASIC21.34■■□□□ 1.01
Cul9Q80TT8 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Cul9Q80TT8 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Cul9Q80TT8 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Cul9Q80TT8 Gm44799-201ENSMUST00000207639 1202 ntBASIC21.34■■□□□ 1.01
Cul9Q80TT8 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Cul9Q80TT8 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Cul9Q80TT8 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Cul9Q80TT8 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC21.34■■□□□ 1.01
Cul9Q80TT8 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Cul9Q80TT8 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Cul9Q80TT8 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC21.33■■□□□ 1.01
Cul9Q80TT8 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC21.33■■□□□ 1.01
Cul9Q80TT8 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
Cul9Q80TT8 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Cul9Q80TT8 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Cul9Q80TT8 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Cul9Q80TT8 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Cul9Q80TT8 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC21.33■■□□□ 1
Cul9Q80TT8 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1
Cul9Q80TT8 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC21.33■■□□□ 1
Cul9Q80TT8 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC21.33■■□□□ 1
Cul9Q80TT8 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC21.32■■□□□ 1
Cul9Q80TT8 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC21.32■■□□□ 1
Cul9Q80TT8 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC21.32■■□□□ 1
Cul9Q80TT8 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Cul9Q80TT8 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC21.32■■□□□ 1
Cul9Q80TT8 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Cul9Q80TT8 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC21.32■■□□□ 1
Cul9Q80TT8 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Cul9Q80TT8 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC21.32■■□□□ 1
Cul9Q80TT8 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Cul9Q80TT8 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC21.32■■□□□ 1
Cul9Q80TT8 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC21.32■■□□□ 1
Cul9Q80TT8 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC21.32■■□□□ 1
Cul9Q80TT8 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC21.32■■□□□ 1
Cul9Q80TT8 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC21.32■■□□□ 1
Cul9Q80TT8 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Cul9Q80TT8 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC21.32■■□□□ 1
Cul9Q80TT8 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Cul9Q80TT8 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Cul9Q80TT8 Gm26596-201ENSMUST00000180464 2655 ntBASIC21.31■■□□□ 1
Cul9Q80TT8 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
Cul9Q80TT8 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC21.31■■□□□ 1
Cul9Q80TT8 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC21.31■■□□□ 1
Cul9Q80TT8 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC21.31■■□□□ 1
Cul9Q80TT8 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC21.31■■□□□ 1
Cul9Q80TT8 Gm14723-201ENSMUST00000118686 215 ntBASIC21.31■■□□□ 1
Cul9Q80TT8 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC21.31■■□□□ 1
Cul9Q80TT8 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC21.31■■□□□ 1
Cul9Q80TT8 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Cul9Q80TT8 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Cul9Q80TT8 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Cul9Q80TT8 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Cul9Q80TT8 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC21.31■■□□□ 1
Cul9Q80TT8 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Cul9Q80TT8 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Cul9Q80TT8 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC21.31■■□□□ 1
Cul9Q80TT8 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC21.31■■□□□ 1
Cul9Q80TT8 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC21.3■■□□□ 1
Cul9Q80TT8 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Cul9Q80TT8 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Cul9Q80TT8 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Cul9Q80TT8 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Cul9Q80TT8 Gm11661-201ENSMUST00000121761 1327 ntBASIC21.3■■□□□ 1
Cul9Q80TT8 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC21.3■■□□□ 1
Cul9Q80TT8 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Cul9Q80TT8 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms