Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Prpf38bQ80SY5 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Prpf38bQ80SY5 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Prpf38bQ80SY5 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Prpf38bQ80SY5 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Prpf38bQ80SY5 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
Prpf38bQ80SY5 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Prpf38bQ80SY5 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Prpf38bQ80SY5 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Prpf38bQ80SY5 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Prpf38bQ80SY5 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Prpf38bQ80SY5 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Prpf38bQ80SY5 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Prpf38bQ80SY5 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Prpf38bQ80SY5 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Prpf38bQ80SY5 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC15.86■□□□□ 0.13
Prpf38bQ80SY5 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Prpf38bQ80SY5 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Prpf38bQ80SY5 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Prpf38bQ80SY5 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Prpf38bQ80SY5 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC15.86■□□□□ 0.13
Prpf38bQ80SY5 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC15.86■□□□□ 0.13
Prpf38bQ80SY5 Nrn1-204ENSMUST00000224323 1779 ntBASIC15.86■□□□□ 0.13
Prpf38bQ80SY5 Gm15653-201ENSMUST00000119247 907 ntBASIC15.86■□□□□ 0.13
Prpf38bQ80SY5 Gm22175-201ENSMUST00000175007 78 ntBASIC15.86■□□□□ 0.13
Prpf38bQ80SY5 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC15.86■□□□□ 0.13
Prpf38bQ80SY5 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Prpf38bQ80SY5 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC15.86■□□□□ 0.13
Prpf38bQ80SY5 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC15.86■□□□□ 0.13
Prpf38bQ80SY5 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Prpf38bQ80SY5 AC126408.1-201ENSMUST00000225184 523 ntBASIC15.86■□□□□ 0.13
Prpf38bQ80SY5 AC155252.2-201ENSMUST00000226946 680 ntBASIC15.86■□□□□ 0.13
Prpf38bQ80SY5 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Prpf38bQ80SY5 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Prpf38bQ80SY5 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Prpf38bQ80SY5 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Prpf38bQ80SY5 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Prpf38bQ80SY5 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Prpf38bQ80SY5 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Prpf38bQ80SY5 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Prpf38bQ80SY5 Gm13332-201ENSMUST00000120451 1398 ntBASIC15.86■□□□□ 0.13
Prpf38bQ80SY5 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Prpf38bQ80SY5 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Prpf38bQ80SY5 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Prpf38bQ80SY5 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC15.85■□□□□ 0.13
Prpf38bQ80SY5 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Prpf38bQ80SY5 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Prpf38bQ80SY5 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC15.85■□□□□ 0.13
Prpf38bQ80SY5 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Prpf38bQ80SY5 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Prpf38bQ80SY5 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Prpf38bQ80SY5 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Prpf38bQ80SY5 Gm13365-201ENSMUST00000121188 973 ntBASIC15.85■□□□□ 0.13
Prpf38bQ80SY5 Gm2308-201ENSMUST00000166539 1004 ntBASIC15.85■□□□□ 0.13
Prpf38bQ80SY5 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
Prpf38bQ80SY5 Mir6990-201ENSMUST00000183724 91 ntBASIC15.85■□□□□ 0.13
Prpf38bQ80SY5 Gm27622-201ENSMUST00000183779 60 ntBASIC15.85■□□□□ 0.13
Prpf38bQ80SY5 Gm27430-201ENSMUST00000184585 107 ntBASIC15.85■□□□□ 0.13
Prpf38bQ80SY5 Gm37153-201ENSMUST00000193637 231 ntBASIC15.85■□□□□ 0.13
Prpf38bQ80SY5 Gm44333-201ENSMUST00000197168 107 ntBASIC15.85■□□□□ 0.13
Prpf38bQ80SY5 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Prpf38bQ80SY5 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Prpf38bQ80SY5 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Prpf38bQ80SY5 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Prpf38bQ80SY5 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Prpf38bQ80SY5 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Prpf38bQ80SY5 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Prpf38bQ80SY5 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Prpf38bQ80SY5 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Prpf38bQ80SY5 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Prpf38bQ80SY5 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Prpf38bQ80SY5 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Prpf38bQ80SY5 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Prpf38bQ80SY5 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Prpf38bQ80SY5 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Prpf38bQ80SY5 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Prpf38bQ80SY5 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Prpf38bQ80SY5 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Prpf38bQ80SY5 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Prpf38bQ80SY5 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Prpf38bQ80SY5 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Prpf38bQ80SY5 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Prpf38bQ80SY5 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Prpf38bQ80SY5 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Prpf38bQ80SY5 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Prpf38bQ80SY5 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC15.84■□□□□ 0.13
Prpf38bQ80SY5 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Prpf38bQ80SY5 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Prpf38bQ80SY5 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Prpf38bQ80SY5 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC15.84■□□□□ 0.13
Prpf38bQ80SY5 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Prpf38bQ80SY5 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC15.84■□□□□ 0.13
Prpf38bQ80SY5 AC125206.2-201ENSMUST00000217454 574 ntBASIC15.84■□□□□ 0.13
Prpf38bQ80SY5 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Prpf38bQ80SY5 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Prpf38bQ80SY5 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Prpf38bQ80SY5 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Prpf38bQ80SY5 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC15.84■□□□□ 0.13
Prpf38bQ80SY5 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Prpf38bQ80SY5 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms