Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC14.99□□□□□ -0.01
Pcdh8Q7TSK3 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdh8Q7TSK3 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Pcdh8Q7TSK3 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdh8Q7TSK3 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdh8Q7TSK3 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdh8Q7TSK3 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdh8Q7TSK3 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC14.99□□□□□ -0.01
Pcdh8Q7TSK3 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdh8Q7TSK3 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdh8Q7TSK3 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdh8Q7TSK3 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdh8Q7TSK3 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdh8Q7TSK3 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdh8Q7TSK3 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Pcdh8Q7TSK3 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdh8Q7TSK3 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdh8Q7TSK3 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdh8Q7TSK3 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdh8Q7TSK3 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdh8Q7TSK3 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdh8Q7TSK3 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdh8Q7TSK3 Gm18246-201ENSMUST00000221023 728 ntBASIC14.98□□□□□ -0.01
Pcdh8Q7TSK3 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdh8Q7TSK3 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdh8Q7TSK3 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdh8Q7TSK3 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Pcdh8Q7TSK3 AC154412.1-201ENSMUST00000226540 2786 ntBASIC14.98□□□□□ -0.01
Pcdh8Q7TSK3 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdh8Q7TSK3 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdh8Q7TSK3 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdh8Q7TSK3 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC14.98□□□□□ -0.01
Pcdh8Q7TSK3 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Pcdh8Q7TSK3 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdh8Q7TSK3 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC14.97□□□□□ -0.01
Pcdh8Q7TSK3 Gm13294-201ENSMUST00000121757 1330 ntBASIC14.97□□□□□ -0.01
Pcdh8Q7TSK3 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdh8Q7TSK3 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdh8Q7TSK3 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdh8Q7TSK3 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC14.97□□□□□ -0.01
Pcdh8Q7TSK3 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdh8Q7TSK3 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdh8Q7TSK3 Gm7669-201ENSMUST00000210184 1603 ntBASIC14.97□□□□□ -0.01
Pcdh8Q7TSK3 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdh8Q7TSK3 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdh8Q7TSK3 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdh8Q7TSK3 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC14.97□□□□□ -0.01
Pcdh8Q7TSK3 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC14.97□□□□□ -0.01
Pcdh8Q7TSK3 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdh8Q7TSK3 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdh8Q7TSK3 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdh8Q7TSK3 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdh8Q7TSK3 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Pcdh8Q7TSK3 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdh8Q7TSK3 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdh8Q7TSK3 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdh8Q7TSK3 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdh8Q7TSK3 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdh8Q7TSK3 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdh8Q7TSK3 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdh8Q7TSK3 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Pcdh8Q7TSK3 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdh8Q7TSK3 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdh8Q7TSK3 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC14.96□□□□□ -0.01
Pcdh8Q7TSK3 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdh8Q7TSK3 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdh8Q7TSK3 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC14.96□□□□□ -0.01
Pcdh8Q7TSK3 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC14.96□□□□□ -0.01
Pcdh8Q7TSK3 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdh8Q7TSK3 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC14.96□□□□□ -0.01
Pcdh8Q7TSK3 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Pcdh8Q7TSK3 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdh8Q7TSK3 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdh8Q7TSK3 Gm17968-201ENSMUST00000194902 784 ntBASIC14.96□□□□□ -0.01
Pcdh8Q7TSK3 Chchd1-203ENSMUST00000224633 557 ntBASIC14.96□□□□□ -0.01
Pcdh8Q7TSK3 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdh8Q7TSK3 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdh8Q7TSK3 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
Pcdh8Q7TSK3 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdh8Q7TSK3 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC14.96□□□□□ -0.01
Pcdh8Q7TSK3 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Pcdh8Q7TSK3 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Pcdh8Q7TSK3 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Pcdh8Q7TSK3 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Pcdh8Q7TSK3 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Pcdh8Q7TSK3 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Pcdh8Q7TSK3 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Pcdh8Q7TSK3 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Pcdh8Q7TSK3 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdh8Q7TSK3 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Pcdh8Q7TSK3 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdh8Q7TSK3 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdh8Q7TSK3 Gm29361-201ENSMUST00000183323 2000 ntBASIC14.95□□□□□ -0.02
Pcdh8Q7TSK3 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdh8Q7TSK3 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdh8Q7TSK3 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdh8Q7TSK3 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdh8Q7TSK3 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdh8Q7TSK3 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdh8Q7TSK3 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms