Protein–RNA interactions for Protein: Q7TNK1

Rfx4, Transcription factor RFX4, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx4Q7TNK1 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rfx4Q7TNK1 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rfx4Q7TNK1 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC14.59□□□□□ -0.07
Rfx4Q7TNK1 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Rfx4Q7TNK1 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rfx4Q7TNK1 Gm11355-201ENSMUST00000121120 306 ntBASIC14.59□□□□□ -0.07
Rfx4Q7TNK1 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Rfx4Q7TNK1 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Rfx4Q7TNK1 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rfx4Q7TNK1 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rfx4Q7TNK1 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rfx4Q7TNK1 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Rfx4Q7TNK1 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Rfx4Q7TNK1 Gm45058-201ENSMUST00000205810 766 ntBASIC14.59□□□□□ -0.07
Rfx4Q7TNK1 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rfx4Q7TNK1 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC14.59□□□□□ -0.07
Rfx4Q7TNK1 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC14.59□□□□□ -0.07
Rfx4Q7TNK1 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rfx4Q7TNK1 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Rfx4Q7TNK1 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Rfx4Q7TNK1 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
Rfx4Q7TNK1 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Rfx4Q7TNK1 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Rfx4Q7TNK1 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Rfx4Q7TNK1 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC14.58□□□□□ -0.07
Rfx4Q7TNK1 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Rfx4Q7TNK1 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Rfx4Q7TNK1 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
Rfx4Q7TNK1 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rfx4Q7TNK1 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rfx4Q7TNK1 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Rfx4Q7TNK1 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rfx4Q7TNK1 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rfx4Q7TNK1 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
Rfx4Q7TNK1 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Rfx4Q7TNK1 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rfx4Q7TNK1 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rfx4Q7TNK1 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rfx4Q7TNK1 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rfx4Q7TNK1 Gm13559-201ENSMUST00000120476 863 ntBASIC14.58□□□□□ -0.08
Rfx4Q7TNK1 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Rfx4Q7TNK1 Gm23547-201ENSMUST00000158210 271 ntBASIC14.58□□□□□ -0.08
Rfx4Q7TNK1 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC14.58□□□□□ -0.08
Rfx4Q7TNK1 Gm1818-201ENSMUST00000169406 1184 ntBASIC14.58□□□□□ -0.08
Rfx4Q7TNK1 Gm20472-201ENSMUST00000174403 1240 ntBASIC14.58□□□□□ -0.08
Rfx4Q7TNK1 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC14.58□□□□□ -0.08
Rfx4Q7TNK1 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC14.58□□□□□ -0.08
Rfx4Q7TNK1 AC125350.1-201ENSMUST00000225115 903 ntBASIC14.58□□□□□ -0.08
Rfx4Q7TNK1 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC14.58□□□□□ -0.08
Rfx4Q7TNK1 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rfx4Q7TNK1 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rfx4Q7TNK1 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Rfx4Q7TNK1 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Rfx4Q7TNK1 Gm43509-201ENSMUST00000196551 2594 ntBASIC14.58□□□□□ -0.08
Rfx4Q7TNK1 Gm43205-201ENSMUST00000198622 1968 ntBASIC14.58□□□□□ -0.08
Rfx4Q7TNK1 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Rfx4Q7TNK1 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Rfx4Q7TNK1 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rfx4Q7TNK1 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rfx4Q7TNK1 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Rfx4Q7TNK1 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Rfx4Q7TNK1 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC14.58□□□□□ -0.08
Rfx4Q7TNK1 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rfx4Q7TNK1 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rfx4Q7TNK1 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC14.57□□□□□ -0.08
Rfx4Q7TNK1 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rfx4Q7TNK1 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Rfx4Q7TNK1 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rfx4Q7TNK1 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rfx4Q7TNK1 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rfx4Q7TNK1 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rfx4Q7TNK1 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC14.57□□□□□ -0.08
Rfx4Q7TNK1 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rfx4Q7TNK1 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Rfx4Q7TNK1 Gm21559-201ENSMUST00000220638 855 ntBASIC14.57□□□□□ -0.08
Rfx4Q7TNK1 AC130713.1-201ENSMUST00000228853 1096 ntBASIC14.57□□□□□ -0.08
Rfx4Q7TNK1 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rfx4Q7TNK1 Gm8587-201ENSMUST00000076538 843 ntBASIC14.57□□□□□ -0.08
Rfx4Q7TNK1 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rfx4Q7TNK1 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rfx4Q7TNK1 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rfx4Q7TNK1 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC14.57□□□□□ -0.08
Rfx4Q7TNK1 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Rfx4Q7TNK1 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Rfx4Q7TNK1 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC14.57□□□□□ -0.08
Rfx4Q7TNK1 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rfx4Q7TNK1 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rfx4Q7TNK1 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rfx4Q7TNK1 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rfx4Q7TNK1 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rfx4Q7TNK1 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rfx4Q7TNK1 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rfx4Q7TNK1 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rfx4Q7TNK1 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Rfx4Q7TNK1 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC14.56□□□□□ -0.08
Rfx4Q7TNK1 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Rfx4Q7TNK1 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC14.56□□□□□ -0.08
Rfx4Q7TNK1 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC14.56□□□□□ -0.08
Rfx4Q7TNK1 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC14.56□□□□□ -0.08
Rfx4Q7TNK1 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC14.56□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 63.4 ms