Protein–RNA interactions for Protein: Q70E20

Sned1, Sushi, nidogen and EGF-like domain-containing protein 1, mousemouse

Predictions only

Length 1,403 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sned1Q70E20 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sned1Q70E20 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC18.07■□□□□ 0.48
Sned1Q70E20 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sned1Q70E20 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC18.06■□□□□ 0.48
Sned1Q70E20 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC18.06■□□□□ 0.48
Sned1Q70E20 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC18.06■□□□□ 0.48
Sned1Q70E20 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
Sned1Q70E20 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sned1Q70E20 Gm45841-201ENSMUST00000207700 164 ntBASIC18.06■□□□□ 0.48
Sned1Q70E20 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sned1Q70E20 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sned1Q70E20 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sned1Q70E20 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC18.06■□□□□ 0.48
Sned1Q70E20 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sned1Q70E20 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Sned1Q70E20 Gm45751-201ENSMUST00000210185 1573 ntBASIC18.06■□□□□ 0.48
Sned1Q70E20 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC18.06■□□□□ 0.48
Sned1Q70E20 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Sned1Q70E20 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sned1Q70E20 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC18.06■□□□□ 0.48
Sned1Q70E20 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sned1Q70E20 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sned1Q70E20 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Sned1Q70E20 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sned1Q70E20 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Sned1Q70E20 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Sned1Q70E20 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sned1Q70E20 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Sned1Q70E20 Snora78-201ENSMUST00000158630 128 ntBASIC18.06■□□□□ 0.48
Sned1Q70E20 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Sned1Q70E20 Gm37230-201ENSMUST00000194491 818 ntBASIC18.06■□□□□ 0.48
Sned1Q70E20 Gm42693-201ENSMUST00000196779 631 ntBASIC18.06■□□□□ 0.48
Sned1Q70E20 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC18.06■□□□□ 0.48
Sned1Q70E20 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC18.06■□□□□ 0.48
Sned1Q70E20 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sned1Q70E20 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Sned1Q70E20 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sned1Q70E20 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Sned1Q70E20 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Sned1Q70E20 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC18.05■□□□□ 0.48
Sned1Q70E20 AC154527.2-201ENSMUST00000225256 1466 ntBASIC18.05■□□□□ 0.48
Sned1Q70E20 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Sned1Q70E20 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sned1Q70E20 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
Sned1Q70E20 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Sned1Q70E20 Gm45606-201ENSMUST00000209836 2795 ntBASIC18.05■□□□□ 0.48
Sned1Q70E20 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sned1Q70E20 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC18.05■□□□□ 0.48
Sned1Q70E20 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Sned1Q70E20 AA619741-201ENSMUST00000195095 646 ntBASIC18.05■□□□□ 0.48
Sned1Q70E20 Gm6916-202ENSMUST00000205523 195 ntBASIC18.05■□□□□ 0.48
Sned1Q70E20 AC121804.3-201ENSMUST00000223420 295 ntBASIC18.05■□□□□ 0.48
Sned1Q70E20 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Sned1Q70E20 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Sned1Q70E20 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sned1Q70E20 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC18.05■□□□□ 0.48
Sned1Q70E20 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sned1Q70E20 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Sned1Q70E20 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
Sned1Q70E20 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sned1Q70E20 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC18.04■□□□□ 0.48
Sned1Q70E20 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sned1Q70E20 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sned1Q70E20 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sned1Q70E20 BC001981-202ENSMUST00000191393 1545 ntBASIC18.04■□□□□ 0.48
Sned1Q70E20 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Sned1Q70E20 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sned1Q70E20 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sned1Q70E20 Gm15198-201ENSMUST00000117283 177 ntBASIC18.04■□□□□ 0.48
Sned1Q70E20 Gm12585-201ENSMUST00000117307 290 ntBASIC18.04■□□□□ 0.48
Sned1Q70E20 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC18.04■□□□□ 0.48
Sned1Q70E20 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Sned1Q70E20 Gm6244-201ENSMUST00000178732 841 ntBASIC18.04■□□□□ 0.48
Sned1Q70E20 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sned1Q70E20 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sned1Q70E20 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sned1Q70E20 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sned1Q70E20 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Sned1Q70E20 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sned1Q70E20 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sned1Q70E20 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Sned1Q70E20 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sned1Q70E20 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sned1Q70E20 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sned1Q70E20 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sned1Q70E20 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sned1Q70E20 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sned1Q70E20 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sned1Q70E20 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC18.03■□□□□ 0.48
Sned1Q70E20 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC18.03■□□□□ 0.48
Sned1Q70E20 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sned1Q70E20 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sned1Q70E20 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Sned1Q70E20 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sned1Q70E20 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sned1Q70E20 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sned1Q70E20 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Sned1Q70E20 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sned1Q70E20 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC18.03■□□□□ 0.48
Sned1Q70E20 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms