Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ddx55Q6ZPL9 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ddx55Q6ZPL9 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ddx55Q6ZPL9 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ddx55Q6ZPL9 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ddx55Q6ZPL9 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ddx55Q6ZPL9 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
Ddx55Q6ZPL9 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ddx55Q6ZPL9 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Ddx55Q6ZPL9 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ddx55Q6ZPL9 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ddx55Q6ZPL9 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ddx55Q6ZPL9 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Ddx55Q6ZPL9 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC17.17■□□□□ 0.34
Ddx55Q6ZPL9 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ddx55Q6ZPL9 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ddx55Q6ZPL9 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ddx55Q6ZPL9 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ddx55Q6ZPL9 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Ddx55Q6ZPL9 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ddx55Q6ZPL9 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ddx55Q6ZPL9 Gm12859-201ENSMUST00000117834 427 ntBASIC17.17■□□□□ 0.34
Ddx55Q6ZPL9 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ddx55Q6ZPL9 Gm29667-201ENSMUST00000190817 490 ntBASIC17.17■□□□□ 0.34
Ddx55Q6ZPL9 AL593843.1-201ENSMUST00000195891 145 ntBASIC17.17■□□□□ 0.34
Ddx55Q6ZPL9 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Ddx55Q6ZPL9 Gm6218-201ENSMUST00000219812 628 ntBASIC17.17■□□□□ 0.34
Ddx55Q6ZPL9 AC090659.2-201ENSMUST00000225378 1186 ntBASIC17.17■□□□□ 0.34
Ddx55Q6ZPL9 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ddx55Q6ZPL9 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Ddx55Q6ZPL9 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC17.17■□□□□ 0.34
Ddx55Q6ZPL9 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ddx55Q6ZPL9 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ddx55Q6ZPL9 Gm6263-201ENSMUST00000120029 1342 ntBASIC17.17■□□□□ 0.34
Ddx55Q6ZPL9 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ddx55Q6ZPL9 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ddx55Q6ZPL9 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ddx55Q6ZPL9 Gm5320-201ENSMUST00000207163 1519 ntBASIC17.16■□□□□ 0.34
Ddx55Q6ZPL9 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ddx55Q6ZPL9 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ddx55Q6ZPL9 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Ddx55Q6ZPL9 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
Ddx55Q6ZPL9 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC17.16■□□□□ 0.34
Ddx55Q6ZPL9 Gm14928-201ENSMUST00000120198 477 ntBASIC17.16■□□□□ 0.34
Ddx55Q6ZPL9 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC17.16■□□□□ 0.34
Ddx55Q6ZPL9 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC17.16■□□□□ 0.34
Ddx55Q6ZPL9 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC17.16■□□□□ 0.34
Ddx55Q6ZPL9 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ddx55Q6ZPL9 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC17.16■□□□□ 0.34
Ddx55Q6ZPL9 AC130829.1-201ENSMUST00000221548 494 ntBASIC17.16■□□□□ 0.34
Ddx55Q6ZPL9 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ddx55Q6ZPL9 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ddx55Q6ZPL9 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ddx55Q6ZPL9 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Ddx55Q6ZPL9 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ddx55Q6ZPL9 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Ddx55Q6ZPL9 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC17.16■□□□□ 0.34
Ddx55Q6ZPL9 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ddx55Q6ZPL9 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Ddx55Q6ZPL9 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ddx55Q6ZPL9 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Ddx55Q6ZPL9 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ddx55Q6ZPL9 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ddx55Q6ZPL9 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ddx55Q6ZPL9 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Ddx55Q6ZPL9 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ddx55Q6ZPL9 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC17.15■□□□□ 0.34
Ddx55Q6ZPL9 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ddx55Q6ZPL9 Gm4204-201ENSMUST00000110798 1231 ntBASIC17.15■□□□□ 0.34
Ddx55Q6ZPL9 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC17.15■□□□□ 0.34
Ddx55Q6ZPL9 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC17.15■□□□□ 0.34
Ddx55Q6ZPL9 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ddx55Q6ZPL9 AC238811.1-201ENSMUST00000225302 441 ntBASIC17.15■□□□□ 0.34
Ddx55Q6ZPL9 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ddx55Q6ZPL9 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ddx55Q6ZPL9 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ddx55Q6ZPL9 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ddx55Q6ZPL9 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ddx55Q6ZPL9 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ddx55Q6ZPL9 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ddx55Q6ZPL9 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ddx55Q6ZPL9 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ddx55Q6ZPL9 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ddx55Q6ZPL9 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Ddx55Q6ZPL9 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Ddx55Q6ZPL9 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ddx55Q6ZPL9 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ddx55Q6ZPL9 Gm6756-201ENSMUST00000180647 1620 ntBASIC17.14■□□□□ 0.33
Ddx55Q6ZPL9 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Ddx55Q6ZPL9 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ddx55Q6ZPL9 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ddx55Q6ZPL9 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ddx55Q6ZPL9 AC164565.1-201ENSMUST00000217520 1484 ntBASIC17.14■□□□□ 0.33
Ddx55Q6ZPL9 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ddx55Q6ZPL9 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ddx55Q6ZPL9 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ddx55Q6ZPL9 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ddx55Q6ZPL9 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC17.14■□□□□ 0.33
Ddx55Q6ZPL9 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ddx55Q6ZPL9 Gm5479-201ENSMUST00000160578 435 ntBASIC17.14■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms