Protein–RNA interactions for Protein: Q6PE54

Dhx40, Probable ATP-dependent RNA helicase DHX40, mousemouse

Known RBP Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dhx40Q6PE54 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Dhx40Q6PE54 Gm23547-201ENSMUST00000158210 271 ntBASIC16.88■□□□□ 0.29
Dhx40Q6PE54 Gm25745-201ENSMUST00000174945 133 ntBASIC16.88■□□□□ 0.29
Dhx40Q6PE54 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Dhx40Q6PE54 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Dhx40Q6PE54 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Dhx40Q6PE54 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Dhx40Q6PE54 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Dhx40Q6PE54 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Dhx40Q6PE54 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Dhx40Q6PE54 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Dhx40Q6PE54 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Dhx40Q6PE54 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Dhx40Q6PE54 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Dhx40Q6PE54 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Dhx40Q6PE54 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Dhx40Q6PE54 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Dhx40Q6PE54 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Dhx40Q6PE54 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Dhx40Q6PE54 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC16.87■□□□□ 0.29
Dhx40Q6PE54 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Dhx40Q6PE54 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Dhx40Q6PE54 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Dhx40Q6PE54 Gm42632-201ENSMUST00000201707 2411 ntBASIC16.87■□□□□ 0.29
Dhx40Q6PE54 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Dhx40Q6PE54 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Dhx40Q6PE54 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Dhx40Q6PE54 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC16.87■□□□□ 0.29
Dhx40Q6PE54 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Dhx40Q6PE54 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Dhx40Q6PE54 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Dhx40Q6PE54 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Dhx40Q6PE54 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Dhx40Q6PE54 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Dhx40Q6PE54 Gm43205-201ENSMUST00000198622 1968 ntBASIC16.87■□□□□ 0.29
Dhx40Q6PE54 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Dhx40Q6PE54 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Dhx40Q6PE54 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Dhx40Q6PE54 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Dhx40Q6PE54 Gm45293-201ENSMUST00000209754 1812 ntBASIC16.86■□□□□ 0.29
Dhx40Q6PE54 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Dhx40Q6PE54 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Dhx40Q6PE54 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Dhx40Q6PE54 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Dhx40Q6PE54 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Dhx40Q6PE54 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Dhx40Q6PE54 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Dhx40Q6PE54 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Dhx40Q6PE54 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Dhx40Q6PE54 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC16.86■□□□□ 0.29
Dhx40Q6PE54 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC16.86■□□□□ 0.29
Dhx40Q6PE54 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC16.86■□□□□ 0.29
Dhx40Q6PE54 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC16.86■□□□□ 0.29
Dhx40Q6PE54 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Dhx40Q6PE54 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Dhx40Q6PE54 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Dhx40Q6PE54 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Dhx40Q6PE54 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Dhx40Q6PE54 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Dhx40Q6PE54 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Dhx40Q6PE54 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Dhx40Q6PE54 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Dhx40Q6PE54 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Dhx40Q6PE54 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Dhx40Q6PE54 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Dhx40Q6PE54 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Dhx40Q6PE54 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
Dhx40Q6PE54 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Dhx40Q6PE54 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Dhx40Q6PE54 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC16.86■□□□□ 0.29
Dhx40Q6PE54 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC16.85■□□□□ 0.29
Dhx40Q6PE54 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Dhx40Q6PE54 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Dhx40Q6PE54 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Dhx40Q6PE54 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Dhx40Q6PE54 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Dhx40Q6PE54 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Dhx40Q6PE54 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Dhx40Q6PE54 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Dhx40Q6PE54 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Dhx40Q6PE54 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Dhx40Q6PE54 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Dhx40Q6PE54 Gm8344-201ENSMUST00000119813 856 ntBASIC16.85■□□□□ 0.29
Dhx40Q6PE54 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Dhx40Q6PE54 Gm17807-201ENSMUST00000186869 298 ntBASIC16.85■□□□□ 0.29
Dhx40Q6PE54 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC16.85■□□□□ 0.29
Dhx40Q6PE54 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC16.85■□□□□ 0.29
Dhx40Q6PE54 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Dhx40Q6PE54 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Dhx40Q6PE54 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Dhx40Q6PE54 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Dhx40Q6PE54 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC16.85■□□□□ 0.29
Dhx40Q6PE54 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
Dhx40Q6PE54 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Dhx40Q6PE54 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Dhx40Q6PE54 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Dhx40Q6PE54 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Dhx40Q6PE54 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Dhx40Q6PE54 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Dhx40Q6PE54 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms