Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Snrnp40Q6PE01 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC13.3□□□□□ -0.28
Snrnp40Q6PE01 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Snrnp40Q6PE01 Gm14026-201ENSMUST00000120625 1789 ntBASIC13.3□□□□□ -0.28
Snrnp40Q6PE01 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Snrnp40Q6PE01 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Snrnp40Q6PE01 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Snrnp40Q6PE01 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Snrnp40Q6PE01 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC13.3□□□□□ -0.28
Snrnp40Q6PE01 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Snrnp40Q6PE01 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Snrnp40Q6PE01 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Snrnp40Q6PE01 Gm15593-201ENSMUST00000122085 1008 ntBASIC13.3□□□□□ -0.28
Snrnp40Q6PE01 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Snrnp40Q6PE01 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Snrnp40Q6PE01 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC13.3□□□□□ -0.28
Snrnp40Q6PE01 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Snrnp40Q6PE01 Gm27838-201ENSMUST00000184829 128 ntBASIC13.3□□□□□ -0.28
Snrnp40Q6PE01 Gm44344-201ENSMUST00000200287 129 ntBASIC13.3□□□□□ -0.28
Snrnp40Q6PE01 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC13.3□□□□□ -0.28
Snrnp40Q6PE01 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Snrnp40Q6PE01 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Snrnp40Q6PE01 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Snrnp40Q6PE01 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC13.3□□□□□ -0.28
Snrnp40Q6PE01 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Snrnp40Q6PE01 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Snrnp40Q6PE01 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC13.3□□□□□ -0.28
Snrnp40Q6PE01 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC13.3□□□□□ -0.28
Snrnp40Q6PE01 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
Snrnp40Q6PE01 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Snrnp40Q6PE01 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC13.29□□□□□ -0.28
Snrnp40Q6PE01 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Snrnp40Q6PE01 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC13.29□□□□□ -0.28
Snrnp40Q6PE01 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Snrnp40Q6PE01 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Snrnp40Q6PE01 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Snrnp40Q6PE01 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Snrnp40Q6PE01 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Snrnp40Q6PE01 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Snrnp40Q6PE01 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Snrnp40Q6PE01 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Snrnp40Q6PE01 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Snrnp40Q6PE01 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Snrnp40Q6PE01 Gm6539-201ENSMUST00000119157 1064 ntBASIC13.29□□□□□ -0.28
Snrnp40Q6PE01 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Snrnp40Q6PE01 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC13.29□□□□□ -0.28
Snrnp40Q6PE01 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC13.29□□□□□ -0.28
Snrnp40Q6PE01 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC13.29□□□□□ -0.28
Snrnp40Q6PE01 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Snrnp40Q6PE01 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Snrnp40Q6PE01 Gm27533-201ENSMUST00000183800 152 ntBASIC13.29□□□□□ -0.28
Snrnp40Q6PE01 Klk2-ps-201ENSMUST00000205342 571 ntBASIC13.29□□□□□ -0.28
Snrnp40Q6PE01 Gm7775-201ENSMUST00000218871 853 ntBASIC13.29□□□□□ -0.28
Snrnp40Q6PE01 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC13.29□□□□□ -0.28
Snrnp40Q6PE01 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Snrnp40Q6PE01 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Snrnp40Q6PE01 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Snrnp40Q6PE01 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Snrnp40Q6PE01 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Snrnp40Q6PE01 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC13.29□□□□□ -0.28
Snrnp40Q6PE01 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Snrnp40Q6PE01 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC13.29□□□□□ -0.28
Snrnp40Q6PE01 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Snrnp40Q6PE01 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Snrnp40Q6PE01 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Snrnp40Q6PE01 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Snrnp40Q6PE01 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Snrnp40Q6PE01 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Snrnp40Q6PE01 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Snrnp40Q6PE01 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Snrnp40Q6PE01 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Snrnp40Q6PE01 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Snrnp40Q6PE01 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Snrnp40Q6PE01 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Snrnp40Q6PE01 Gm27680-201ENSMUST00000184192 160 ntBASIC13.28□□□□□ -0.28
Snrnp40Q6PE01 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Snrnp40Q6PE01 Gm9794-201ENSMUST00000202370 423 ntBASIC13.28□□□□□ -0.28
Snrnp40Q6PE01 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC13.28□□□□□ -0.28
Snrnp40Q6PE01 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC13.28□□□□□ -0.28
Snrnp40Q6PE01 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Snrnp40Q6PE01 AC158529.1-201ENSMUST00000223618 239 ntBASIC13.28□□□□□ -0.28
Snrnp40Q6PE01 CT009510.1-201ENSMUST00000227972 270 ntBASIC13.28□□□□□ -0.28
Snrnp40Q6PE01 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
Snrnp40Q6PE01 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Snrnp40Q6PE01 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Snrnp40Q6PE01 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Snrnp40Q6PE01 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Snrnp40Q6PE01 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC13.28□□□□□ -0.28
Snrnp40Q6PE01 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Snrnp40Q6PE01 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Snrnp40Q6PE01 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Snrnp40Q6PE01 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Snrnp40Q6PE01 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Snrnp40Q6PE01 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Snrnp40Q6PE01 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Snrnp40Q6PE01 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Snrnp40Q6PE01 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC13.28□□□□□ -0.28
Snrnp40Q6PE01 AC131743.5-201ENSMUST00000220775 1618 ntBASIC13.28□□□□□ -0.28
Snrnp40Q6PE01 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Snrnp40Q6PE01 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms