Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC14.42□□□□□ -0.1
Rnf220Q6PDX6 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rnf220Q6PDX6 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Rnf220Q6PDX6 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Rnf220Q6PDX6 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Rnf220Q6PDX6 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rnf220Q6PDX6 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Rnf220Q6PDX6 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Rnf220Q6PDX6 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rnf220Q6PDX6 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rnf220Q6PDX6 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Rnf220Q6PDX6 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rnf220Q6PDX6 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC14.42□□□□□ -0.1
Rnf220Q6PDX6 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rnf220Q6PDX6 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Rnf220Q6PDX6 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Rnf220Q6PDX6 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rnf220Q6PDX6 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rnf220Q6PDX6 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Rnf220Q6PDX6 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC14.41□□□□□ -0.1
Rnf220Q6PDX6 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf220Q6PDX6 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf220Q6PDX6 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf220Q6PDX6 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf220Q6PDX6 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf220Q6PDX6 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf220Q6PDX6 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Rnf220Q6PDX6 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf220Q6PDX6 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf220Q6PDX6 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf220Q6PDX6 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf220Q6PDX6 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf220Q6PDX6 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf220Q6PDX6 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Rnf220Q6PDX6 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf220Q6PDX6 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC14.41□□□□□ -0.1
Rnf220Q6PDX6 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf220Q6PDX6 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf220Q6PDX6 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC14.41□□□□□ -0.1
Rnf220Q6PDX6 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC14.41□□□□□ -0.1
Rnf220Q6PDX6 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf220Q6PDX6 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf220Q6PDX6 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf220Q6PDX6 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Rnf220Q6PDX6 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf220Q6PDX6 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf220Q6PDX6 AC153366.2-201ENSMUST00000219461 1984 ntBASIC14.41□□□□□ -0.1
Rnf220Q6PDX6 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf220Q6PDX6 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf220Q6PDX6 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC14.41□□□□□ -0.1
Rnf220Q6PDX6 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf220Q6PDX6 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf220Q6PDX6 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf220Q6PDX6 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf220Q6PDX6 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf220Q6PDX6 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf220Q6PDX6 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf220Q6PDX6 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf220Q6PDX6 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Rnf220Q6PDX6 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC14.4□□□□□ -0.1
Rnf220Q6PDX6 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf220Q6PDX6 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf220Q6PDX6 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf220Q6PDX6 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf220Q6PDX6 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC14.4□□□□□ -0.1
Rnf220Q6PDX6 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Rnf220Q6PDX6 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC14.4□□□□□ -0.1
Rnf220Q6PDX6 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf220Q6PDX6 Gm18421-201ENSMUST00000204122 625 ntBASIC14.4□□□□□ -0.1
Rnf220Q6PDX6 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Rnf220Q6PDX6 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf220Q6PDX6 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf220Q6PDX6 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf220Q6PDX6 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Rnf220Q6PDX6 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf220Q6PDX6 Gm26513-201ENSMUST00000181802 2489 ntBASIC14.4□□□□□ -0.1
Rnf220Q6PDX6 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf220Q6PDX6 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf220Q6PDX6 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC14.4□□□□□ -0.1
Rnf220Q6PDX6 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf220Q6PDX6 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf220Q6PDX6 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf220Q6PDX6 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf220Q6PDX6 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf220Q6PDX6 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC14.4□□□□□ -0.11
Rnf220Q6PDX6 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Rnf220Q6PDX6 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Rnf220Q6PDX6 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Rnf220Q6PDX6 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rnf220Q6PDX6 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rnf220Q6PDX6 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Rnf220Q6PDX6 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Rnf220Q6PDX6 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rnf220Q6PDX6 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rnf220Q6PDX6 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rnf220Q6PDX6 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Rnf220Q6PDX6 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC14.39□□□□□ -0.11
Rnf220Q6PDX6 Gm14464-201ENSMUST00000119658 1254 ntBASIC14.39□□□□□ -0.11
Rnf220Q6PDX6 Gm37055-201ENSMUST00000191866 133 ntBASIC14.39□□□□□ -0.11
Rnf220Q6PDX6 Gm36967-201ENSMUST00000193814 266 ntBASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms