Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Chd4Q6PDQ2 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Chd4Q6PDQ2 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Chd4Q6PDQ2 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Chd4Q6PDQ2 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Chd4Q6PDQ2 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Chd4Q6PDQ2 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Chd4Q6PDQ2 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Chd4Q6PDQ2 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC19.57■□□□□ 0.72
Chd4Q6PDQ2 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Chd4Q6PDQ2 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Chd4Q6PDQ2 Gm12490-201ENSMUST00000120255 560 ntBASIC19.57■□□□□ 0.72
Chd4Q6PDQ2 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Chd4Q6PDQ2 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC19.57■□□□□ 0.72
Chd4Q6PDQ2 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Chd4Q6PDQ2 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Chd4Q6PDQ2 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Chd4Q6PDQ2 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Chd4Q6PDQ2 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Chd4Q6PDQ2 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Chd4Q6PDQ2 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Chd4Q6PDQ2 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Chd4Q6PDQ2 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Chd4Q6PDQ2 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Chd4Q6PDQ2 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Chd4Q6PDQ2 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Chd4Q6PDQ2 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
Chd4Q6PDQ2 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC19.56■□□□□ 0.72
Chd4Q6PDQ2 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Chd4Q6PDQ2 Gm3436-201ENSMUST00000179930 840 ntBASIC19.56■□□□□ 0.72
Chd4Q6PDQ2 Gm9726-201ENSMUST00000180321 678 ntBASIC19.56■□□□□ 0.72
Chd4Q6PDQ2 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Chd4Q6PDQ2 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Chd4Q6PDQ2 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Chd4Q6PDQ2 Gm5320-201ENSMUST00000207163 1519 ntBASIC19.56■□□□□ 0.72
Chd4Q6PDQ2 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Chd4Q6PDQ2 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Chd4Q6PDQ2 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Chd4Q6PDQ2 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC19.56■□□□□ 0.72
Chd4Q6PDQ2 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Chd4Q6PDQ2 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Chd4Q6PDQ2 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Chd4Q6PDQ2 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
Chd4Q6PDQ2 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Chd4Q6PDQ2 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Chd4Q6PDQ2 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC19.55■□□□□ 0.72
Chd4Q6PDQ2 AC156016.3-201ENSMUST00000228623 344 ntBASIC19.55■□□□□ 0.72
Chd4Q6PDQ2 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Chd4Q6PDQ2 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Chd4Q6PDQ2 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Chd4Q6PDQ2 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Chd4Q6PDQ2 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC19.55■□□□□ 0.72
Chd4Q6PDQ2 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Chd4Q6PDQ2 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Chd4Q6PDQ2 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC19.55■□□□□ 0.72
Chd4Q6PDQ2 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Chd4Q6PDQ2 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Chd4Q6PDQ2 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Chd4Q6PDQ2 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Chd4Q6PDQ2 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC19.55■□□□□ 0.72
Chd4Q6PDQ2 Gm16476-201ENSMUST00000221544 139 ntBASIC19.55■□□□□ 0.72
Chd4Q6PDQ2 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Chd4Q6PDQ2 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Chd4Q6PDQ2 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Chd4Q6PDQ2 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Chd4Q6PDQ2 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Chd4Q6PDQ2 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Chd4Q6PDQ2 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Chd4Q6PDQ2 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Chd4Q6PDQ2 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Chd4Q6PDQ2 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Chd4Q6PDQ2 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Chd4Q6PDQ2 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Chd4Q6PDQ2 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC19.54■□□□□ 0.72
Chd4Q6PDQ2 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Chd4Q6PDQ2 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Chd4Q6PDQ2 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Chd4Q6PDQ2 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Chd4Q6PDQ2 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Chd4Q6PDQ2 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Chd4Q6PDQ2 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Chd4Q6PDQ2 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Chd4Q6PDQ2 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Chd4Q6PDQ2 AC124751.1-201ENSMUST00000222716 1408 ntBASIC19.53■□□□□ 0.72
Chd4Q6PDQ2 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Chd4Q6PDQ2 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Chd4Q6PDQ2 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Chd4Q6PDQ2 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Chd4Q6PDQ2 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC19.53■□□□□ 0.72
Chd4Q6PDQ2 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC19.53■□□□□ 0.72
Chd4Q6PDQ2 AC135669.1-201ENSMUST00000213585 412 ntBASIC19.53■□□□□ 0.72
Chd4Q6PDQ2 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Chd4Q6PDQ2 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Chd4Q6PDQ2 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Chd4Q6PDQ2 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Chd4Q6PDQ2 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Chd4Q6PDQ2 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Chd4Q6PDQ2 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Chd4Q6PDQ2 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Chd4Q6PDQ2 Gm15321-201ENSMUST00000121290 288 ntBASIC19.53■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms