Protein–RNA interactions for Protein: Q6P8W9

Hmgb4, High mobility group protein B4, mousemouse

Predictions only

Length 181 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb4Q6P8W9 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC15.92■□□□□ 0.14
Hmgb4Q6P8W9 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Hmgb4Q6P8W9 Chchd1-203ENSMUST00000224633 557 ntBASIC15.92■□□□□ 0.14
Hmgb4Q6P8W9 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Hmgb4Q6P8W9 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Hmgb4Q6P8W9 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Hmgb4Q6P8W9 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Hmgb4Q6P8W9 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC15.92■□□□□ 0.14
Hmgb4Q6P8W9 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC15.92■□□□□ 0.14
Hmgb4Q6P8W9 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Hmgb4Q6P8W9 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Hmgb4Q6P8W9 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC15.92■□□□□ 0.14
Hmgb4Q6P8W9 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Hmgb4Q6P8W9 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC15.92■□□□□ 0.14
Hmgb4Q6P8W9 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Hmgb4Q6P8W9 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Hmgb4Q6P8W9 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Hmgb4Q6P8W9 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Hmgb4Q6P8W9 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Hmgb4Q6P8W9 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Hmgb4Q6P8W9 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC15.91■□□□□ 0.14
Hmgb4Q6P8W9 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Hmgb4Q6P8W9 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Hmgb4Q6P8W9 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC15.91■□□□□ 0.14
Hmgb4Q6P8W9 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC15.91■□□□□ 0.14
Hmgb4Q6P8W9 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Hmgb4Q6P8W9 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC15.91■□□□□ 0.14
Hmgb4Q6P8W9 Mir7036b-201ENSMUST00000184791 63 ntBASIC15.91■□□□□ 0.14
Hmgb4Q6P8W9 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC15.91■□□□□ 0.14
Hmgb4Q6P8W9 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Hmgb4Q6P8W9 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC15.91■□□□□ 0.14
Hmgb4Q6P8W9 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Hmgb4Q6P8W9 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Hmgb4Q6P8W9 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Hmgb4Q6P8W9 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
Hmgb4Q6P8W9 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Hmgb4Q6P8W9 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Hmgb4Q6P8W9 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Hmgb4Q6P8W9 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Hmgb4Q6P8W9 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Hmgb4Q6P8W9 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
Hmgb4Q6P8W9 Ptprs-211ENSMUST00000223859 5588 ntBASIC15.9■□□□□ 0.14
Hmgb4Q6P8W9 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Hmgb4Q6P8W9 Sybu-209ENSMUST00000228639 4113 ntBASIC15.9■□□□□ 0.14
Hmgb4Q6P8W9 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC15.9■□□□□ 0.14
Hmgb4Q6P8W9 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Hmgb4Q6P8W9 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Hmgb4Q6P8W9 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC15.9■□□□□ 0.14
Hmgb4Q6P8W9 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC15.9■□□□□ 0.14
Hmgb4Q6P8W9 Gm17968-201ENSMUST00000194902 784 ntBASIC15.9■□□□□ 0.14
Hmgb4Q6P8W9 AC159295.1-201ENSMUST00000225326 940 ntBASIC15.9■□□□□ 0.14
Hmgb4Q6P8W9 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Hmgb4Q6P8W9 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Hmgb4Q6P8W9 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC15.9■□□□□ 0.14
Hmgb4Q6P8W9 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Hmgb4Q6P8W9 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Hmgb4Q6P8W9 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
Hmgb4Q6P8W9 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Hmgb4Q6P8W9 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Hmgb4Q6P8W9 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC15.9■□□□□ 0.14
Hmgb4Q6P8W9 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Hmgb4Q6P8W9 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Hmgb4Q6P8W9 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Hmgb4Q6P8W9 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Hmgb4Q6P8W9 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Hmgb4Q6P8W9 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Hmgb4Q6P8W9 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Hmgb4Q6P8W9 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Hmgb4Q6P8W9 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Hmgb4Q6P8W9 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Hmgb4Q6P8W9 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC15.89■□□□□ 0.13
Hmgb4Q6P8W9 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Hmgb4Q6P8W9 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Hmgb4Q6P8W9 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Hmgb4Q6P8W9 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Hmgb4Q6P8W9 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Hmgb4Q6P8W9 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Hmgb4Q6P8W9 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC15.89■□□□□ 0.13
Hmgb4Q6P8W9 Gm38318-201ENSMUST00000195769 1706 ntBASIC15.89■□□□□ 0.13
Hmgb4Q6P8W9 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Hmgb4Q6P8W9 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Hmgb4Q6P8W9 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
Hmgb4Q6P8W9 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Hmgb4Q6P8W9 Gm10576-201ENSMUST00000191927 825 ntBASIC15.89■□□□□ 0.13
Hmgb4Q6P8W9 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Hmgb4Q6P8W9 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Hmgb4Q6P8W9 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Hmgb4Q6P8W9 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Hmgb4Q6P8W9 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Hmgb4Q6P8W9 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Hmgb4Q6P8W9 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Hmgb4Q6P8W9 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Hmgb4Q6P8W9 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Hmgb4Q6P8W9 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Hmgb4Q6P8W9 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Hmgb4Q6P8W9 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Hmgb4Q6P8W9 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Hmgb4Q6P8W9 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Hmgb4Q6P8W9 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Hmgb4Q6P8W9 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms