Protein–RNA interactions for Protein: Q6P1Y1

Rtl3, Retrotransposon Gag-like protein 3, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl3Q6P1Y1 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Rtl3Q6P1Y1 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rtl3Q6P1Y1 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rtl3Q6P1Y1 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rtl3Q6P1Y1 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC15.68■□□□□ 0.1
Rtl3Q6P1Y1 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rtl3Q6P1Y1 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rtl3Q6P1Y1 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rtl3Q6P1Y1 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC15.68■□□□□ 0.1
Rtl3Q6P1Y1 Gm18246-201ENSMUST00000221023 728 ntBASIC15.68■□□□□ 0.1
Rtl3Q6P1Y1 Ndufaf2-202ENSMUST00000223734 556 ntBASIC15.68■□□□□ 0.1
Rtl3Q6P1Y1 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rtl3Q6P1Y1 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Rtl3Q6P1Y1 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Rtl3Q6P1Y1 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rtl3Q6P1Y1 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rtl3Q6P1Y1 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Rtl3Q6P1Y1 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
Rtl3Q6P1Y1 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rtl3Q6P1Y1 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rtl3Q6P1Y1 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rtl3Q6P1Y1 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rtl3Q6P1Y1 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Rtl3Q6P1Y1 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rtl3Q6P1Y1 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
Rtl3Q6P1Y1 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Rtl3Q6P1Y1 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Rtl3Q6P1Y1 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rtl3Q6P1Y1 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rtl3Q6P1Y1 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rtl3Q6P1Y1 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Rtl3Q6P1Y1 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rtl3Q6P1Y1 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Rtl3Q6P1Y1 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Rtl3Q6P1Y1 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC15.67■□□□□ 0.1
Rtl3Q6P1Y1 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC15.67■□□□□ 0.1
Rtl3Q6P1Y1 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rtl3Q6P1Y1 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rtl3Q6P1Y1 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rtl3Q6P1Y1 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC15.67■□□□□ 0.1
Rtl3Q6P1Y1 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rtl3Q6P1Y1 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rtl3Q6P1Y1 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rtl3Q6P1Y1 Gm45293-201ENSMUST00000209754 1812 ntBASIC15.66■□□□□ 0.1
Rtl3Q6P1Y1 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rtl3Q6P1Y1 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rtl3Q6P1Y1 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
Rtl3Q6P1Y1 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Rtl3Q6P1Y1 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rtl3Q6P1Y1 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rtl3Q6P1Y1 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rtl3Q6P1Y1 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Rtl3Q6P1Y1 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Rtl3Q6P1Y1 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Rtl3Q6P1Y1 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rtl3Q6P1Y1 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rtl3Q6P1Y1 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rtl3Q6P1Y1 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Rtl3Q6P1Y1 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
Rtl3Q6P1Y1 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rtl3Q6P1Y1 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rtl3Q6P1Y1 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rtl3Q6P1Y1 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Rtl3Q6P1Y1 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Rtl3Q6P1Y1 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC15.66■□□□□ 0.1
Rtl3Q6P1Y1 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rtl3Q6P1Y1 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rtl3Q6P1Y1 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Rtl3Q6P1Y1 AC119177.1-201ENSMUST00000227647 1332 ntBASIC15.66■□□□□ 0.1
Rtl3Q6P1Y1 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rtl3Q6P1Y1 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rtl3Q6P1Y1 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rtl3Q6P1Y1 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Rtl3Q6P1Y1 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
Rtl3Q6P1Y1 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rtl3Q6P1Y1 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rtl3Q6P1Y1 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rtl3Q6P1Y1 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Rtl3Q6P1Y1 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rtl3Q6P1Y1 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC15.65■□□□□ 0.1
Rtl3Q6P1Y1 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rtl3Q6P1Y1 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rtl3Q6P1Y1 Gm13597-201ENSMUST00000121239 375 ntBASIC15.65■□□□□ 0.1
Rtl3Q6P1Y1 Mir3113-201ENSMUST00000175478 76 ntBASIC15.65■□□□□ 0.1
Rtl3Q6P1Y1 Mir8117-201ENSMUST00000184773 107 ntBASIC15.65■□□□□ 0.1
Rtl3Q6P1Y1 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC15.65■□□□□ 0.1
Rtl3Q6P1Y1 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rtl3Q6P1Y1 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rtl3Q6P1Y1 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rtl3Q6P1Y1 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rtl3Q6P1Y1 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rtl3Q6P1Y1 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
Rtl3Q6P1Y1 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rtl3Q6P1Y1 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rtl3Q6P1Y1 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rtl3Q6P1Y1 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Rtl3Q6P1Y1 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rtl3Q6P1Y1 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.09
Rtl3Q6P1Y1 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Rtl3Q6P1Y1 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms