Protein–RNA interactions for Protein: Q6NZM9

Hdac4, Histone deacetylase 4, mousemouse

Predictions only

Length 1,076 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac4Q6NZM9 Gm4899-201ENSMUST00000178708 719 ntBASIC16.98■□□□□ 0.31
Hdac4Q6NZM9 AC164629.2-201ENSMUST00000217916 270 ntBASIC16.98■□□□□ 0.31
Hdac4Q6NZM9 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC16.98■□□□□ 0.31
Hdac4Q6NZM9 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Hdac4Q6NZM9 Gm43598-201ENSMUST00000202482 2479 ntBASIC16.98■□□□□ 0.31
Hdac4Q6NZM9 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Hdac4Q6NZM9 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Hdac4Q6NZM9 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Hdac4Q6NZM9 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Hdac4Q6NZM9 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Hdac4Q6NZM9 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Hdac4Q6NZM9 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC16.98■□□□□ 0.31
Hdac4Q6NZM9 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Hdac4Q6NZM9 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Hdac4Q6NZM9 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Hdac4Q6NZM9 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Hdac4Q6NZM9 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Hdac4Q6NZM9 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Hdac4Q6NZM9 Efs-202ENSMUST00000227037 2540 ntBASIC16.97■□□□□ 0.31
Hdac4Q6NZM9 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Hdac4Q6NZM9 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Hdac4Q6NZM9 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Hdac4Q6NZM9 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC16.97■□□□□ 0.31
Hdac4Q6NZM9 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC16.97■□□□□ 0.31
Hdac4Q6NZM9 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Hdac4Q6NZM9 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC16.97■□□□□ 0.31
Hdac4Q6NZM9 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Hdac4Q6NZM9 Gm43767-201ENSMUST00000198933 381 ntBASIC16.97■□□□□ 0.31
Hdac4Q6NZM9 Gm43935-201ENSMUST00000203569 1050 ntBASIC16.97■□□□□ 0.31
Hdac4Q6NZM9 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Hdac4Q6NZM9 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Hdac4Q6NZM9 Gm29340-201ENSMUST00000188763 3854 ntBASIC16.97■□□□□ 0.31
Hdac4Q6NZM9 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Hdac4Q6NZM9 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Hdac4Q6NZM9 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Hdac4Q6NZM9 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Hdac4Q6NZM9 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Hdac4Q6NZM9 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Hdac4Q6NZM9 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Hdac4Q6NZM9 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Hdac4Q6NZM9 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Hdac4Q6NZM9 Gm43195-201ENSMUST00000200614 2332 ntBASIC16.96■□□□□ 0.31
Hdac4Q6NZM9 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Hdac4Q6NZM9 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Hdac4Q6NZM9 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Hdac4Q6NZM9 Gm13036-201ENSMUST00000117799 748 ntBASIC16.96■□□□□ 0.31
Hdac4Q6NZM9 Gm6184-201ENSMUST00000120403 1261 ntBASIC16.96■□□□□ 0.31
Hdac4Q6NZM9 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC16.96■□□□□ 0.31
Hdac4Q6NZM9 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC16.96■□□□□ 0.31
Hdac4Q6NZM9 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC16.96■□□□□ 0.31
Hdac4Q6NZM9 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Hdac4Q6NZM9 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Hdac4Q6NZM9 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Hdac4Q6NZM9 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Hdac4Q6NZM9 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Hdac4Q6NZM9 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC16.96■□□□□ 0.31
Hdac4Q6NZM9 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Hdac4Q6NZM9 Gm16425-201ENSMUST00000118143 3130 ntBASIC16.96■□□□□ 0.31
Hdac4Q6NZM9 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Hdac4Q6NZM9 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Hdac4Q6NZM9 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Hdac4Q6NZM9 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
Hdac4Q6NZM9 Gm29361-201ENSMUST00000183323 2000 ntBASIC16.96■□□□□ 0.3
Hdac4Q6NZM9 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Hdac4Q6NZM9 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Hdac4Q6NZM9 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Hdac4Q6NZM9 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC16.96■□□□□ 0.3
Hdac4Q6NZM9 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Hdac4Q6NZM9 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Hdac4Q6NZM9 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Hdac4Q6NZM9 Gm37812-201ENSMUST00000195216 2475 ntBASIC16.95■□□□□ 0.3
Hdac4Q6NZM9 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Hdac4Q6NZM9 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Hdac4Q6NZM9 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Hdac4Q6NZM9 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Hdac4Q6NZM9 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Hdac4Q6NZM9 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Hdac4Q6NZM9 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Hdac4Q6NZM9 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC16.95■□□□□ 0.3
Hdac4Q6NZM9 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Hdac4Q6NZM9 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Hdac4Q6NZM9 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC16.95■□□□□ 0.3
Hdac4Q6NZM9 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Hdac4Q6NZM9 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Hdac4Q6NZM9 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
Hdac4Q6NZM9 Gm9768-201ENSMUST00000206007 2861 ntBASIC16.95■□□□□ 0.3
Hdac4Q6NZM9 Camk2g-217ENSMUST00000226630 1937 ntBASIC16.95■□□□□ 0.3
Hdac4Q6NZM9 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Hdac4Q6NZM9 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Hdac4Q6NZM9 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Hdac4Q6NZM9 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Hdac4Q6NZM9 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Hdac4Q6NZM9 AC119177.1-201ENSMUST00000227647 1332 ntBASIC16.95■□□□□ 0.3
Hdac4Q6NZM9 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Hdac4Q6NZM9 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Hdac4Q6NZM9 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Hdac4Q6NZM9 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Hdac4Q6NZM9 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Hdac4Q6NZM9 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Hdac4Q6NZM9 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 70.7 ms