Protein–RNA interactions for Protein: Q62388

Atm, Serine-protein kinase ATM, mousemouse

Predictions only

Length 3,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AtmQ62388 Gm8399-201ENSMUST00000082300 1117 ntBASIC14.18□□□□□ -0.14
AtmQ62388 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
AtmQ62388 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
AtmQ62388 Gm15236-201ENSMUST00000117309 379 ntBASIC14.18□□□□□ -0.14
AtmQ62388 Gm15806-201ENSMUST00000120696 955 ntBASIC14.18□□□□□ -0.14
AtmQ62388 Gm27892-201ENSMUST00000185017 106 ntBASIC14.18□□□□□ -0.14
AtmQ62388 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
AtmQ62388 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC14.18□□□□□ -0.14
AtmQ62388 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
AtmQ62388 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
AtmQ62388 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
AtmQ62388 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
AtmQ62388 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
AtmQ62388 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
AtmQ62388 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
AtmQ62388 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC14.17□□□□□ -0.14
AtmQ62388 Gm17420-201ENSMUST00000164753 153 ntBASIC14.17□□□□□ -0.14
AtmQ62388 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC14.17□□□□□ -0.14
AtmQ62388 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC14.17□□□□□ -0.14
AtmQ62388 CT010506.4-201ENSMUST00000225457 351 ntBASIC14.17□□□□□ -0.14
AtmQ62388 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
AtmQ62388 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
AtmQ62388 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
AtmQ62388 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
AtmQ62388 Gm6756-201ENSMUST00000180647 1620 ntBASIC14.17□□□□□ -0.14
AtmQ62388 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC14.17□□□□□ -0.14
AtmQ62388 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC14.17□□□□□ -0.14
AtmQ62388 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
AtmQ62388 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
AtmQ62388 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC14.17□□□□□ -0.14
AtmQ62388 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
AtmQ62388 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC14.17□□□□□ -0.14
AtmQ62388 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
AtmQ62388 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
AtmQ62388 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
AtmQ62388 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
AtmQ62388 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
AtmQ62388 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC14.17□□□□□ -0.14
AtmQ62388 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
AtmQ62388 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
AtmQ62388 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
AtmQ62388 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
AtmQ62388 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
AtmQ62388 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
AtmQ62388 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
AtmQ62388 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
AtmQ62388 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
AtmQ62388 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
AtmQ62388 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
AtmQ62388 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
AtmQ62388 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC14.16□□□□□ -0.14
AtmQ62388 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
AtmQ62388 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
AtmQ62388 AC158529.1-201ENSMUST00000223618 239 ntBASIC14.16□□□□□ -0.14
AtmQ62388 AC160980.1-201ENSMUST00000224136 970 ntBASIC14.16□□□□□ -0.14
AtmQ62388 AC090659.2-201ENSMUST00000225378 1186 ntBASIC14.16□□□□□ -0.14
AtmQ62388 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
AtmQ62388 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
AtmQ62388 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC14.16□□□□□ -0.14
AtmQ62388 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
AtmQ62388 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
AtmQ62388 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
AtmQ62388 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
AtmQ62388 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
AtmQ62388 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC14.16□□□□□ -0.14
AtmQ62388 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC14.16□□□□□ -0.14
AtmQ62388 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
AtmQ62388 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC14.16□□□□□ -0.14
AtmQ62388 CT485787.1-201ENSMUST00000225617 968 ntBASIC14.16□□□□□ -0.14
AtmQ62388 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
AtmQ62388 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
AtmQ62388 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
AtmQ62388 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
AtmQ62388 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
AtmQ62388 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
AtmQ62388 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
AtmQ62388 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
AtmQ62388 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
AtmQ62388 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
AtmQ62388 Mir1897-201ENSMUST00000122581 272 ntBASIC14.15□□□□□ -0.14
AtmQ62388 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
AtmQ62388 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
AtmQ62388 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
AtmQ62388 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
AtmQ62388 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
AtmQ62388 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
AtmQ62388 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
AtmQ62388 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC14.15□□□□□ -0.14
AtmQ62388 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC14.15□□□□□ -0.14
AtmQ62388 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC14.15□□□□□ -0.14
AtmQ62388 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC14.15□□□□□ -0.14
AtmQ62388 AC159896.2-201ENSMUST00000214753 269 ntBASIC14.15□□□□□ -0.14
AtmQ62388 AC154319.1-201ENSMUST00000216330 312 ntBASIC14.15□□□□□ -0.14
AtmQ62388 AL589735.1-201ENSMUST00000224353 270 ntBASIC14.15□□□□□ -0.14
AtmQ62388 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
AtmQ62388 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
AtmQ62388 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
AtmQ62388 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.15
AtmQ62388 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
AtmQ62388 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms