Protein–RNA interactions for Protein: Q62232

Six2, Homeobox protein SIX2, mousemouse

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six2Q62232 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Six2Q62232 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Six2Q62232 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Six2Q62232 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Six2Q62232 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Six2Q62232 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Six2Q62232 AC119177.1-201ENSMUST00000227647 1332 ntBASIC16.17■□□□□ 0.18
Six2Q62232 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Six2Q62232 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Six2Q62232 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Six2Q62232 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Six2Q62232 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Six2Q62232 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Six2Q62232 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Six2Q62232 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Six2Q62232 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Six2Q62232 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC16.16■□□□□ 0.18
Six2Q62232 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC16.16■□□□□ 0.18
Six2Q62232 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC16.16■□□□□ 0.18
Six2Q62232 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC16.16■□□□□ 0.18
Six2Q62232 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC16.16■□□□□ 0.18
Six2Q62232 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Six2Q62232 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC16.16■□□□□ 0.18
Six2Q62232 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Six2Q62232 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Six2Q62232 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Six2Q62232 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Six2Q62232 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Six2Q62232 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Six2Q62232 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Six2Q62232 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Six2Q62232 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Six2Q62232 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Six2Q62232 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
Six2Q62232 Gm13036-201ENSMUST00000117799 748 ntBASIC16.15■□□□□ 0.18
Six2Q62232 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Six2Q62232 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC16.15■□□□□ 0.18
Six2Q62232 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC16.15■□□□□ 0.18
Six2Q62232 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Six2Q62232 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Six2Q62232 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Six2Q62232 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Six2Q62232 Mxra8os-201ENSMUST00000097740 687 ntBASIC16.15■□□□□ 0.18
Six2Q62232 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC16.15■□□□□ 0.18
Six2Q62232 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC16.15■□□□□ 0.18
Six2Q62232 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Six2Q62232 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Six2Q62232 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Six2Q62232 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
Six2Q62232 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Six2Q62232 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Six2Q62232 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC16.14■□□□□ 0.17
Six2Q62232 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Six2Q62232 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Six2Q62232 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.17
Six2Q62232 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC16.14■□□□□ 0.17
Six2Q62232 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Six2Q62232 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Six2Q62232 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Six2Q62232 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC16.14■□□□□ 0.17
Six2Q62232 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Six2Q62232 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Six2Q62232 Gm21009-201ENSMUST00000197169 1669 ntBASIC16.14■□□□□ 0.17
Six2Q62232 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Six2Q62232 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Six2Q62232 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Six2Q62232 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
Six2Q62232 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Six2Q62232 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Six2Q62232 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Six2Q62232 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Six2Q62232 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Six2Q62232 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC16.13■□□□□ 0.17
Six2Q62232 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Six2Q62232 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC16.13■□□□□ 0.17
Six2Q62232 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Six2Q62232 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Six2Q62232 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Six2Q62232 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC16.13■□□□□ 0.17
Six2Q62232 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Six2Q62232 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC16.13■□□□□ 0.17
Six2Q62232 Gm28659-201ENSMUST00000188013 759 ntBASIC16.13■□□□□ 0.17
Six2Q62232 Gm7787-201ENSMUST00000216858 688 ntBASIC16.13■□□□□ 0.17
Six2Q62232 Gm18246-201ENSMUST00000221023 728 ntBASIC16.13■□□□□ 0.17
Six2Q62232 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Six2Q62232 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Six2Q62232 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Six2Q62232 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
Six2Q62232 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC16.13■□□□□ 0.17
Six2Q62232 Sybu-209ENSMUST00000228639 4113 ntBASIC16.13■□□□□ 0.17
Six2Q62232 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Six2Q62232 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Six2Q62232 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Six2Q62232 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Six2Q62232 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
Six2Q62232 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC16.12■□□□□ 0.17
Six2Q62232 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Six2Q62232 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Six2Q62232 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Six2Q62232 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms