Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Gm3695-201ENSMUST00000087222 1009 ntBASIC14.08□□□□□ -0.16
VcanQ62059 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
VcanQ62059 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
VcanQ62059 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
VcanQ62059 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
VcanQ62059 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
VcanQ62059 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
VcanQ62059 Gm27701-201ENSMUST00000184498 110 ntBASIC14.08□□□□□ -0.16
VcanQ62059 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC14.08□□□□□ -0.16
VcanQ62059 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
VcanQ62059 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC14.08□□□□□ -0.16
VcanQ62059 Gm5912-201ENSMUST00000122282 1438 ntBASIC14.07□□□□□ -0.16
VcanQ62059 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC14.07□□□□□ -0.16
VcanQ62059 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
VcanQ62059 Gm3436-201ENSMUST00000179930 840 ntBASIC14.07□□□□□ -0.16
VcanQ62059 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC14.07□□□□□ -0.16
VcanQ62059 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
VcanQ62059 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
VcanQ62059 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
VcanQ62059 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
VcanQ62059 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
VcanQ62059 Gm24543-201ENSMUST00000103867 82 ntBASIC14.07□□□□□ -0.16
VcanQ62059 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC14.07□□□□□ -0.16
VcanQ62059 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
VcanQ62059 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC14.07□□□□□ -0.16
VcanQ62059 Gm9797-201ENSMUST00000052902 613 ntBASIC14.07□□□□□ -0.16
VcanQ62059 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC14.07□□□□□ -0.16
VcanQ62059 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
VcanQ62059 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
VcanQ62059 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
VcanQ62059 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
VcanQ62059 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
VcanQ62059 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
VcanQ62059 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC14.06□□□□□ -0.16
VcanQ62059 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
VcanQ62059 Gm18222-201ENSMUST00000202416 1387 ntBASIC14.06□□□□□ -0.16
VcanQ62059 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
VcanQ62059 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
VcanQ62059 Gm10605-202ENSMUST00000183019 3198 ntBASIC14.06□□□□□ -0.16
VcanQ62059 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
VcanQ62059 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
VcanQ62059 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC14.06□□□□□ -0.16
VcanQ62059 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
VcanQ62059 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
VcanQ62059 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC14.06□□□□□ -0.16
VcanQ62059 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
VcanQ62059 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
VcanQ62059 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
VcanQ62059 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
VcanQ62059 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
VcanQ62059 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC14.06□□□□□ -0.16
VcanQ62059 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
VcanQ62059 Gm27920-201ENSMUST00000183953 96 ntBASIC14.06□□□□□ -0.16
VcanQ62059 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC14.06□□□□□ -0.16
VcanQ62059 Gm10766-202ENSMUST00000194123 606 ntBASIC14.06□□□□□ -0.16
VcanQ62059 Gm44799-201ENSMUST00000207639 1202 ntBASIC14.06□□□□□ -0.16
VcanQ62059 AC155252.1-201ENSMUST00000226462 1208 ntBASIC14.06□□□□□ -0.16
VcanQ62059 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC14.06□□□□□ -0.16
VcanQ62059 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
VcanQ62059 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC14.06□□□□□ -0.16
VcanQ62059 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
VcanQ62059 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC14.06□□□□□ -0.16
VcanQ62059 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
VcanQ62059 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
VcanQ62059 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC14.05□□□□□ -0.16
VcanQ62059 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
VcanQ62059 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
VcanQ62059 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
VcanQ62059 Gm5187-201ENSMUST00000117317 991 ntBASIC14.05□□□□□ -0.16
VcanQ62059 AC090659.2-201ENSMUST00000225378 1186 ntBASIC14.05□□□□□ -0.16
VcanQ62059 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
VcanQ62059 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
VcanQ62059 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
VcanQ62059 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
VcanQ62059 Gm45293-201ENSMUST00000209754 1812 ntBASIC14.05□□□□□ -0.16
VcanQ62059 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
VcanQ62059 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
VcanQ62059 Gm44974-201ENSMUST00000206387 1279 ntBASIC14.05□□□□□ -0.16
VcanQ62059 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
VcanQ62059 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC14.05□□□□□ -0.16
VcanQ62059 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
VcanQ62059 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
VcanQ62059 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
VcanQ62059 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
VcanQ62059 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
VcanQ62059 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
VcanQ62059 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
VcanQ62059 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
VcanQ62059 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
VcanQ62059 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC14.05□□□□□ -0.16
VcanQ62059 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
VcanQ62059 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
VcanQ62059 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
VcanQ62059 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
VcanQ62059 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
VcanQ62059 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
VcanQ62059 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC14.04□□□□□ -0.16
VcanQ62059 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
VcanQ62059 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
VcanQ62059 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC14.04□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms