Protein–RNA interactions for Protein: Q61180

Scnn1a, Amiloride-sensitive sodium channel subunit alpha, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scnn1aQ61180 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Scnn1aQ61180 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Scnn1aQ61180 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC17.4■□□□□ 0.38
Scnn1aQ61180 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC17.4■□□□□ 0.38
Scnn1aQ61180 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Scnn1aQ61180 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Scnn1aQ61180 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Scnn1aQ61180 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Scnn1aQ61180 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC17.4■□□□□ 0.38
Scnn1aQ61180 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Scnn1aQ61180 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Scnn1aQ61180 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Scnn1aQ61180 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Scnn1aQ61180 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Scnn1aQ61180 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Scnn1aQ61180 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC17.39■□□□□ 0.37
Scnn1aQ61180 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Scnn1aQ61180 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Scnn1aQ61180 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Scnn1aQ61180 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Scnn1aQ61180 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Scnn1aQ61180 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC17.39■□□□□ 0.37
Scnn1aQ61180 AA543401-201ENSMUST00000164248 1269 ntBASIC17.39■□□□□ 0.37
Scnn1aQ61180 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Scnn1aQ61180 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC17.39■□□□□ 0.37
Scnn1aQ61180 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC17.39■□□□□ 0.37
Scnn1aQ61180 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC17.39■□□□□ 0.37
Scnn1aQ61180 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC17.39■□□□□ 0.37
Scnn1aQ61180 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Scnn1aQ61180 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Scnn1aQ61180 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Scnn1aQ61180 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Scnn1aQ61180 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC17.39■□□□□ 0.37
Scnn1aQ61180 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Scnn1aQ61180 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Scnn1aQ61180 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Scnn1aQ61180 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Scnn1aQ61180 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
Scnn1aQ61180 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Scnn1aQ61180 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Scnn1aQ61180 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Scnn1aQ61180 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Scnn1aQ61180 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Scnn1aQ61180 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Scnn1aQ61180 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Scnn1aQ61180 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Scnn1aQ61180 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Scnn1aQ61180 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Scnn1aQ61180 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Scnn1aQ61180 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Scnn1aQ61180 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Scnn1aQ61180 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
Scnn1aQ61180 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Scnn1aQ61180 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
Scnn1aQ61180 Gm14091-201ENSMUST00000133534 874 ntTSL 2 BASIC17.38■□□□□ 0.37
Scnn1aQ61180 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
Scnn1aQ61180 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Scnn1aQ61180 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
Scnn1aQ61180 Gm22175-201ENSMUST00000175007 78 ntBASIC17.38■□□□□ 0.37
Scnn1aQ61180 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Scnn1aQ61180 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Scnn1aQ61180 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC17.38■□□□□ 0.37
Scnn1aQ61180 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Scnn1aQ61180 Gm42934-201ENSMUST00000196920 1345 ntBASIC17.38■□□□□ 0.37
Scnn1aQ61180 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
Scnn1aQ61180 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
Scnn1aQ61180 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Scnn1aQ61180 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Scnn1aQ61180 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Scnn1aQ61180 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Scnn1aQ61180 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Scnn1aQ61180 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Scnn1aQ61180 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Scnn1aQ61180 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Scnn1aQ61180 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Scnn1aQ61180 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Scnn1aQ61180 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Scnn1aQ61180 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Scnn1aQ61180 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC17.37■□□□□ 0.37
Scnn1aQ61180 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Scnn1aQ61180 Gm27920-201ENSMUST00000183953 96 ntBASIC17.37■□□□□ 0.37
Scnn1aQ61180 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Scnn1aQ61180 AC124732.2-201ENSMUST00000221977 316 ntBASIC17.37■□□□□ 0.37
Scnn1aQ61180 Mxra8os-201ENSMUST00000097740 687 ntBASIC17.37■□□□□ 0.37
Scnn1aQ61180 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Scnn1aQ61180 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Scnn1aQ61180 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Scnn1aQ61180 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Scnn1aQ61180 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Scnn1aQ61180 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Scnn1aQ61180 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Scnn1aQ61180 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Scnn1aQ61180 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Scnn1aQ61180 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Scnn1aQ61180 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Scnn1aQ61180 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Scnn1aQ61180 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Scnn1aQ61180 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
Scnn1aQ61180 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Scnn1aQ61180 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC17.36■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms