Protein–RNA interactions for Protein: Q60793

Klf4, Krueppel-like factor 4, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Klf4Q60793 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Klf4Q60793 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Klf4Q60793 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Klf4Q60793 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Klf4Q60793 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Klf4Q60793 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Klf4Q60793 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Klf4Q60793 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Klf4Q60793 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Klf4Q60793 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Klf4Q60793 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Klf4Q60793 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Klf4Q60793 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Klf4Q60793 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Klf4Q60793 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Klf4Q60793 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Klf4Q60793 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Klf4Q60793 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Klf4Q60793 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Klf4Q60793 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Klf4Q60793 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Klf4Q60793 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Klf4Q60793 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC14.28□□□□□ -0.12
Klf4Q60793 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC14.28□□□□□ -0.12
Klf4Q60793 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Klf4Q60793 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC14.28□□□□□ -0.12
Klf4Q60793 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Klf4Q60793 Ank2-226ENSMUST00000189368 339 ntBASIC14.28□□□□□ -0.12
Klf4Q60793 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Klf4Q60793 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Klf4Q60793 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Klf4Q60793 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Klf4Q60793 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Klf4Q60793 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Klf4Q60793 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Klf4Q60793 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Klf4Q60793 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Klf4Q60793 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Klf4Q60793 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Klf4Q60793 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Klf4Q60793 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Klf4Q60793 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Klf4Q60793 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Klf4Q60793 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
Klf4Q60793 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Klf4Q60793 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Klf4Q60793 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Klf4Q60793 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC14.27□□□□□ -0.12
Klf4Q60793 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Klf4Q60793 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC14.27□□□□□ -0.12
Klf4Q60793 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Klf4Q60793 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Klf4Q60793 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Klf4Q60793 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Klf4Q60793 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Klf4Q60793 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Klf4Q60793 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Klf4Q60793 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Klf4Q60793 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Klf4Q60793 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Klf4Q60793 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Klf4Q60793 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Klf4Q60793 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Klf4Q60793 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Klf4Q60793 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Klf4Q60793 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Klf4Q60793 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Klf4Q60793 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Klf4Q60793 Gm13418-201ENSMUST00000119097 944 ntBASIC14.27□□□□□ -0.13
Klf4Q60793 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Klf4Q60793 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Klf4Q60793 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC14.27□□□□□ -0.13
Klf4Q60793 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC14.27□□□□□ -0.13
Klf4Q60793 Gm37153-201ENSMUST00000193637 231 ntBASIC14.27□□□□□ -0.13
Klf4Q60793 Gm44357-201ENSMUST00000195897 142 ntBASIC14.27□□□□□ -0.13
Klf4Q60793 Gm19658-201ENSMUST00000196231 138 ntBASIC14.27□□□□□ -0.13
Klf4Q60793 Gm44367-201ENSMUST00000196836 138 ntBASIC14.27□□□□□ -0.13
Klf4Q60793 Gm44350-201ENSMUST00000197197 138 ntBASIC14.27□□□□□ -0.13
Klf4Q60793 Gm9682-201ENSMUST00000197505 556 ntBASIC14.27□□□□□ -0.13
Klf4Q60793 Gm44390-201ENSMUST00000197533 144 ntBASIC14.27□□□□□ -0.13
Klf4Q60793 Gm44313-201ENSMUST00000198018 138 ntBASIC14.27□□□□□ -0.13
Klf4Q60793 Gm44486-201ENSMUST00000198508 138 ntBASIC14.27□□□□□ -0.13
Klf4Q60793 Gm44314-201ENSMUST00000199263 138 ntBASIC14.27□□□□□ -0.13
Klf4Q60793 Gm44394-201ENSMUST00000199558 138 ntBASIC14.27□□□□□ -0.13
Klf4Q60793 Gm44484-201ENSMUST00000199873 138 ntBASIC14.27□□□□□ -0.13
Klf4Q60793 Gm44466-201ENSMUST00000200264 138 ntBASIC14.27□□□□□ -0.13
Klf4Q60793 Gm44359-201ENSMUST00000200671 138 ntBASIC14.27□□□□□ -0.13
Klf4Q60793 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC14.27□□□□□ -0.13
Klf4Q60793 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC14.27□□□□□ -0.13
Klf4Q60793 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Klf4Q60793 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Klf4Q60793 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Klf4Q60793 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Klf4Q60793 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Klf4Q60793 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Klf4Q60793 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Klf4Q60793 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Klf4Q60793 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Klf4Q60793 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Klf4Q60793 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms