Protein–RNA interactions for Protein: Q5R1I9

Trav2, T cell receptor alpha variable 2 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav2Q5R1I9 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav2Q5R1I9 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC12.14□□□□□ -0.47
Trav2Q5R1I9 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC12.14□□□□□ -0.47
Trav2Q5R1I9 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Trav2Q5R1I9 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav2Q5R1I9 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav2Q5R1I9 Gm29361-201ENSMUST00000183323 2000 ntBASIC12.14□□□□□ -0.47
Trav2Q5R1I9 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav2Q5R1I9 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav2Q5R1I9 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav2Q5R1I9 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav2Q5R1I9 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav2Q5R1I9 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav2Q5R1I9 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav2Q5R1I9 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Trav2Q5R1I9 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav2Q5R1I9 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav2Q5R1I9 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav2Q5R1I9 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC12.14□□□□□ -0.47
Trav2Q5R1I9 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav2Q5R1I9 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav2Q5R1I9 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC12.13□□□□□ -0.47
Trav2Q5R1I9 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav2Q5R1I9 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav2Q5R1I9 Gm42473-201ENSMUST00000201056 2291 ntBASIC12.13□□□□□ -0.47
Trav2Q5R1I9 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav2Q5R1I9 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav2Q5R1I9 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav2Q5R1I9 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav2Q5R1I9 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav2Q5R1I9 AC153526.5-201ENSMUST00000218661 2147 ntBASIC12.13□□□□□ -0.47
Trav2Q5R1I9 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC12.13□□□□□ -0.47
Trav2Q5R1I9 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC12.13□□□□□ -0.47
Trav2Q5R1I9 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav2Q5R1I9 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav2Q5R1I9 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav2Q5R1I9 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC12.13□□□□□ -0.47
Trav2Q5R1I9 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC12.13□□□□□ -0.47
Trav2Q5R1I9 Gm7556-201ENSMUST00000201178 1084 ntBASIC12.13□□□□□ -0.47
Trav2Q5R1I9 AC159295.1-201ENSMUST00000225326 940 ntBASIC12.13□□□□□ -0.47
Trav2Q5R1I9 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav2Q5R1I9 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav2Q5R1I9 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC12.13□□□□□ -0.47
Trav2Q5R1I9 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav2Q5R1I9 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav2Q5R1I9 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav2Q5R1I9 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav2Q5R1I9 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav2Q5R1I9 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav2Q5R1I9 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Trav2Q5R1I9 AC119177.1-201ENSMUST00000227647 1332 ntBASIC12.12□□□□□ -0.47
Trav2Q5R1I9 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav2Q5R1I9 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav2Q5R1I9 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC12.12□□□□□ -0.47
Trav2Q5R1I9 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav2Q5R1I9 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav2Q5R1I9 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav2Q5R1I9 Gm5184-201ENSMUST00000220417 1702 ntBASIC12.12□□□□□ -0.47
Trav2Q5R1I9 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav2Q5R1I9 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav2Q5R1I9 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC12.12□□□□□ -0.47
Trav2Q5R1I9 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav2Q5R1I9 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav2Q5R1I9 Gm10499-201ENSMUST00000174094 934 ntBASIC12.12□□□□□ -0.47
Trav2Q5R1I9 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav2Q5R1I9 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC12.12□□□□□ -0.47
Trav2Q5R1I9 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav2Q5R1I9 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav2Q5R1I9 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav2Q5R1I9 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav2Q5R1I9 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
Trav2Q5R1I9 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav2Q5R1I9 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav2Q5R1I9 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav2Q5R1I9 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav2Q5R1I9 Gm45212-201ENSMUST00000205831 3403 ntBASIC12.12□□□□□ -0.47
Trav2Q5R1I9 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav2Q5R1I9 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav2Q5R1I9 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav2Q5R1I9 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav2Q5R1I9 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Trav2Q5R1I9 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav2Q5R1I9 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav2Q5R1I9 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav2Q5R1I9 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Trav2Q5R1I9 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav2Q5R1I9 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav2Q5R1I9 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC12.11□□□□□ -0.47
Trav2Q5R1I9 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Trav2Q5R1I9 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
Trav2Q5R1I9 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav2Q5R1I9 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav2Q5R1I9 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav2Q5R1I9 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav2Q5R1I9 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav2Q5R1I9 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC12.11□□□□□ -0.47
Trav2Q5R1I9 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav2Q5R1I9 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav2Q5R1I9 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav2Q5R1I9 Gm7901-201ENSMUST00000120430 1597 ntBASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms