Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav3-3Q5R1C3 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav3-3Q5R1C3 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC11.41□□□□□ -0.58
Trav3-3Q5R1C3 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav3-3Q5R1C3 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav3-3Q5R1C3 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC11.41□□□□□ -0.58
Trav3-3Q5R1C3 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav3-3Q5R1C3 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav3-3Q5R1C3 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav3-3Q5R1C3 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav3-3Q5R1C3 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav3-3Q5R1C3 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav3-3Q5R1C3 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav3-3Q5R1C3 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC11.41□□□□□ -0.58
Trav3-3Q5R1C3 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav3-3Q5R1C3 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav3-3Q5R1C3 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Trav3-3Q5R1C3 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Trav3-3Q5R1C3 Gm13181-201ENSMUST00000120117 1069 ntBASIC11.41□□□□□ -0.58
Trav3-3Q5R1C3 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC11.41□□□□□ -0.58
Trav3-3Q5R1C3 Gm18958-201ENSMUST00000174258 762 ntBASIC11.41□□□□□ -0.58
Trav3-3Q5R1C3 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav3-3Q5R1C3 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC11.41□□□□□ -0.58
Trav3-3Q5R1C3 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Trav3-3Q5R1C3 Slc35b2-207ENSMUST00000226086 850 ntBASIC11.41□□□□□ -0.58
Trav3-3Q5R1C3 Timm23-208ENSMUST00000226683 750 ntBASIC11.41□□□□□ -0.58
Trav3-3Q5R1C3 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav3-3Q5R1C3 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav3-3Q5R1C3 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Trav3-3Q5R1C3 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav3-3Q5R1C3 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav3-3Q5R1C3 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav3-3Q5R1C3 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav3-3Q5R1C3 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav3-3Q5R1C3 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC11.41□□□□□ -0.58
Trav3-3Q5R1C3 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav3-3Q5R1C3 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Trav3-3Q5R1C3 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav3-3Q5R1C3 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav3-3Q5R1C3 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Trav3-3Q5R1C3 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav3-3Q5R1C3 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav3-3Q5R1C3 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav3-3Q5R1C3 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC11.4□□□□□ -0.58
Trav3-3Q5R1C3 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC11.4□□□□□ -0.58
Trav3-3Q5R1C3 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav3-3Q5R1C3 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav3-3Q5R1C3 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav3-3Q5R1C3 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav3-3Q5R1C3 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav3-3Q5R1C3 Gm42769-201ENSMUST00000198576 1659 ntBASIC11.4□□□□□ -0.58
Trav3-3Q5R1C3 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Trav3-3Q5R1C3 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav3-3Q5R1C3 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC11.4□□□□□ -0.58
Trav3-3Q5R1C3 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav3-3Q5R1C3 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Trav3-3Q5R1C3 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav3-3Q5R1C3 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav3-3Q5R1C3 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trav3-3Q5R1C3 Gm12527-201ENSMUST00000117967 564 ntBASIC11.4□□□□□ -0.58
Trav3-3Q5R1C3 Gm7638-201ENSMUST00000121348 967 ntBASIC11.4□□□□□ -0.58
Trav3-3Q5R1C3 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trav3-3Q5R1C3 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC11.4□□□□□ -0.58
Trav3-3Q5R1C3 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav3-3Q5R1C3 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav3-3Q5R1C3 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav3-3Q5R1C3 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav3-3Q5R1C3 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Trav3-3Q5R1C3 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav3-3Q5R1C3 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav3-3Q5R1C3 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav3-3Q5R1C3 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Trav3-3Q5R1C3 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav3-3Q5R1C3 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC11.4□□□□□ -0.58
Trav3-3Q5R1C3 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav3-3Q5R1C3 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav3-3Q5R1C3 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Trav3-3Q5R1C3 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Trav3-3Q5R1C3 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Trav3-3Q5R1C3 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Trav3-3Q5R1C3 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Trav3-3Q5R1C3 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Trav3-3Q5R1C3 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Trav3-3Q5R1C3 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Trav3-3Q5R1C3 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav3-3Q5R1C3 Rbfox2-206ENSMUST00000227314 1810 ntBASIC11.39□□□□□ -0.59
Trav3-3Q5R1C3 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav3-3Q5R1C3 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav3-3Q5R1C3 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trav3-3Q5R1C3 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav3-3Q5R1C3 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav3-3Q5R1C3 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav3-3Q5R1C3 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav3-3Q5R1C3 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Trav3-3Q5R1C3 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Trav3-3Q5R1C3 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
Trav3-3Q5R1C3 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav3-3Q5R1C3 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trav3-3Q5R1C3 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC11.39□□□□□ -0.59
Trav3-3Q5R1C3 Gm27000-201ENSMUST00000182943 842 ntBASIC11.39□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms