Protein–RNA interactions for Protein: Q52KR3

Prune2, Protein prune homolog 2, mousemouse

Predictions only

Length 3,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prune2Q52KR3 Rn7s1-201ENSMUST00000174924 300 ntBASIC14.02□□□□□ -0.16
Prune2Q52KR3 Rn7s2-201ENSMUST00000175032 300 ntBASIC14.02□□□□□ -0.16
Prune2Q52KR3 Gm26461-201ENSMUST00000175064 290 ntBASIC14.02□□□□□ -0.16
Prune2Q52KR3 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC14.02□□□□□ -0.16
Prune2Q52KR3 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Prune2Q52KR3 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Prune2Q52KR3 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC14.02□□□□□ -0.16
Prune2Q52KR3 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Prune2Q52KR3 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Prune2Q52KR3 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Prune2Q52KR3 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Prune2Q52KR3 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Prune2Q52KR3 Gm6244-201ENSMUST00000178732 841 ntBASIC14.02□□□□□ -0.17
Prune2Q52KR3 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC14.02□□□□□ -0.17
Prune2Q52KR3 Gm7172-201ENSMUST00000218047 1152 ntBASIC14.02□□□□□ -0.17
Prune2Q52KR3 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Prune2Q52KR3 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Prune2Q52KR3 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Prune2Q52KR3 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Prune2Q52KR3 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Prune2Q52KR3 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Prune2Q52KR3 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Prune2Q52KR3 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC14.02□□□□□ -0.17
Prune2Q52KR3 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Prune2Q52KR3 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Prune2Q52KR3 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC14.01□□□□□ -0.17
Prune2Q52KR3 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC14.01□□□□□ -0.17
Prune2Q52KR3 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Prune2Q52KR3 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Prune2Q52KR3 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Prune2Q52KR3 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Prune2Q52KR3 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
Prune2Q52KR3 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Prune2Q52KR3 Gm7067-201ENSMUST00000207698 1249 ntBASIC14.01□□□□□ -0.17
Prune2Q52KR3 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Prune2Q52KR3 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Prune2Q52KR3 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Prune2Q52KR3 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Prune2Q52KR3 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Prune2Q52KR3 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Prune2Q52KR3 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC14.01□□□□□ -0.17
Prune2Q52KR3 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Prune2Q52KR3 AC164565.1-201ENSMUST00000217520 1484 ntBASIC14.01□□□□□ -0.17
Prune2Q52KR3 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Prune2Q52KR3 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC14.01□□□□□ -0.17
Prune2Q52KR3 Gm10766-202ENSMUST00000194123 606 ntBASIC14.01□□□□□ -0.17
Prune2Q52KR3 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Prune2Q52KR3 CT010506.4-201ENSMUST00000225457 351 ntBASIC14.01□□□□□ -0.17
Prune2Q52KR3 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Prune2Q52KR3 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Prune2Q52KR3 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Prune2Q52KR3 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Prune2Q52KR3 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC14.01□□□□□ -0.17
Prune2Q52KR3 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Prune2Q52KR3 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Prune2Q52KR3 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Prune2Q52KR3 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC14□□□□□ -0.17
Prune2Q52KR3 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Prune2Q52KR3 Gm16401-202ENSMUST00000197463 2074 ntBASIC14□□□□□ -0.17
Prune2Q52KR3 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Prune2Q52KR3 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC14□□□□□ -0.17
Prune2Q52KR3 Gm8835-201ENSMUST00000173096 1169 ntBASIC14□□□□□ -0.17
Prune2Q52KR3 CT485787.1-201ENSMUST00000225617 968 ntBASIC14□□□□□ -0.17
Prune2Q52KR3 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
Prune2Q52KR3 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC14□□□□□ -0.17
Prune2Q52KR3 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Prune2Q52KR3 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Prune2Q52KR3 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Prune2Q52KR3 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Prune2Q52KR3 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Prune2Q52KR3 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Prune2Q52KR3 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Prune2Q52KR3 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Prune2Q52KR3 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
Prune2Q52KR3 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Prune2Q52KR3 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Prune2Q52KR3 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Prune2Q52KR3 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC14□□□□□ -0.17
Prune2Q52KR3 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Prune2Q52KR3 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC14□□□□□ -0.17
Prune2Q52KR3 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC14□□□□□ -0.17
Prune2Q52KR3 Olfr582-201ENSMUST00000098212 960 ntBASIC14□□□□□ -0.17
Prune2Q52KR3 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Prune2Q52KR3 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC14□□□□□ -0.17
Prune2Q52KR3 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Prune2Q52KR3 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Prune2Q52KR3 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Prune2Q52KR3 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Prune2Q52KR3 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Prune2Q52KR3 Gm9728-201ENSMUST00000200197 1055 ntBASIC13.99□□□□□ -0.17
Prune2Q52KR3 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Prune2Q52KR3 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Prune2Q52KR3 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Prune2Q52KR3 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
Prune2Q52KR3 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Prune2Q52KR3 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Prune2Q52KR3 AL645783.1-201ENSMUST00000221416 1832 ntBASIC13.99□□□□□ -0.17
Prune2Q52KR3 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
Prune2Q52KR3 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Prune2Q52KR3 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms