Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rc3h1Q4VGL6 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC17.49■□□□□ 0.39
Rc3h1Q4VGL6 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rc3h1Q4VGL6 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Rc3h1Q4VGL6 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Rc3h1Q4VGL6 Gm44616-201ENSMUST00000206417 1732 ntBASIC17.49■□□□□ 0.39
Rc3h1Q4VGL6 Celf4-206ENSMUST00000224553 1729 ntBASIC17.49■□□□□ 0.39
Rc3h1Q4VGL6 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Rc3h1Q4VGL6 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Rc3h1Q4VGL6 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rc3h1Q4VGL6 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rc3h1Q4VGL6 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rc3h1Q4VGL6 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Rc3h1Q4VGL6 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC17.48■□□□□ 0.39
Rc3h1Q4VGL6 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rc3h1Q4VGL6 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
Rc3h1Q4VGL6 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rc3h1Q4VGL6 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC17.48■□□□□ 0.39
Rc3h1Q4VGL6 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rc3h1Q4VGL6 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rc3h1Q4VGL6 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC17.48■□□□□ 0.39
Rc3h1Q4VGL6 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Rc3h1Q4VGL6 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC17.48■□□□□ 0.39
Rc3h1Q4VGL6 Gm16026-204ENSMUST00000162652 683 ntBASIC17.48■□□□□ 0.39
Rc3h1Q4VGL6 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC17.48■□□□□ 0.39
Rc3h1Q4VGL6 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rc3h1Q4VGL6 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rc3h1Q4VGL6 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Rc3h1Q4VGL6 CT025626.1-201ENSMUST00000223735 1455 ntBASIC17.48■□□□□ 0.39
Rc3h1Q4VGL6 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rc3h1Q4VGL6 Nudt18-203ENSMUST00000228768 1578 ntBASIC17.48■□□□□ 0.39
Rc3h1Q4VGL6 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rc3h1Q4VGL6 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rc3h1Q4VGL6 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rc3h1Q4VGL6 Gm6018-201ENSMUST00000216090 1306 ntBASIC17.47■□□□□ 0.39
Rc3h1Q4VGL6 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rc3h1Q4VGL6 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC17.47■□□□□ 0.39
Rc3h1Q4VGL6 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rc3h1Q4VGL6 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rc3h1Q4VGL6 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rc3h1Q4VGL6 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rc3h1Q4VGL6 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Rc3h1Q4VGL6 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Rc3h1Q4VGL6 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rc3h1Q4VGL6 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC17.47■□□□□ 0.39
Rc3h1Q4VGL6 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rc3h1Q4VGL6 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC17.47■□□□□ 0.39
Rc3h1Q4VGL6 AC139382.1-201ENSMUST00000221402 498 ntBASIC17.47■□□□□ 0.39
Rc3h1Q4VGL6 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC17.47■□□□□ 0.39
Rc3h1Q4VGL6 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rc3h1Q4VGL6 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rc3h1Q4VGL6 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Rc3h1Q4VGL6 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rc3h1Q4VGL6 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rc3h1Q4VGL6 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Rc3h1Q4VGL6 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Rc3h1Q4VGL6 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rc3h1Q4VGL6 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rc3h1Q4VGL6 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rc3h1Q4VGL6 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rc3h1Q4VGL6 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC17.47■□□□□ 0.39
Rc3h1Q4VGL6 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rc3h1Q4VGL6 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rc3h1Q4VGL6 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rc3h1Q4VGL6 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC17.47■□□□□ 0.39
Rc3h1Q4VGL6 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rc3h1Q4VGL6 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rc3h1Q4VGL6 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rc3h1Q4VGL6 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rc3h1Q4VGL6 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rc3h1Q4VGL6 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rc3h1Q4VGL6 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rc3h1Q4VGL6 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Rc3h1Q4VGL6 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Rc3h1Q4VGL6 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Rc3h1Q4VGL6 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Rc3h1Q4VGL6 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Rc3h1Q4VGL6 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Rc3h1Q4VGL6 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Rc3h1Q4VGL6 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Rc3h1Q4VGL6 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rc3h1Q4VGL6 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Rc3h1Q4VGL6 Gm18057-201ENSMUST00000208220 503 ntBASIC17.46■□□□□ 0.39
Rc3h1Q4VGL6 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Rc3h1Q4VGL6 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rc3h1Q4VGL6 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Rc3h1Q4VGL6 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Rc3h1Q4VGL6 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC17.46■□□□□ 0.39
Rc3h1Q4VGL6 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Rc3h1Q4VGL6 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rc3h1Q4VGL6 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.38
Rc3h1Q4VGL6 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Rc3h1Q4VGL6 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rc3h1Q4VGL6 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rc3h1Q4VGL6 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rc3h1Q4VGL6 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rc3h1Q4VGL6 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rc3h1Q4VGL6 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rc3h1Q4VGL6 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rc3h1Q4VGL6 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms