Protein–RNA interactions for Protein: Q4FK66

Prpf38a, Pre-mRNA-splicing factor 38A, mousemouse

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38aQ4FK66 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Prpf38aQ4FK66 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Prpf38aQ4FK66 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC17.67■□□□□ 0.42
Prpf38aQ4FK66 Gm37171-201ENSMUST00000192636 1185 ntBASIC17.67■□□□□ 0.42
Prpf38aQ4FK66 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC17.67■□□□□ 0.42
Prpf38aQ4FK66 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC17.67■□□□□ 0.42
Prpf38aQ4FK66 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC17.67■□□□□ 0.42
Prpf38aQ4FK66 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC17.67■□□□□ 0.42
Prpf38aQ4FK66 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Prpf38aQ4FK66 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Prpf38aQ4FK66 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Prpf38aQ4FK66 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC17.67■□□□□ 0.42
Prpf38aQ4FK66 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC17.67■□□□□ 0.42
Prpf38aQ4FK66 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Prpf38aQ4FK66 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC17.67■□□□□ 0.42
Prpf38aQ4FK66 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Prpf38aQ4FK66 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Prpf38aQ4FK66 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Prpf38aQ4FK66 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Prpf38aQ4FK66 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC17.66■□□□□ 0.42
Prpf38aQ4FK66 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC17.66■□□□□ 0.42
Prpf38aQ4FK66 Gm12017-201ENSMUST00000122453 1003 ntBASIC17.66■□□□□ 0.42
Prpf38aQ4FK66 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC17.66■□□□□ 0.42
Prpf38aQ4FK66 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Prpf38aQ4FK66 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Prpf38aQ4FK66 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC17.66■□□□□ 0.42
Prpf38aQ4FK66 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Prpf38aQ4FK66 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Prpf38aQ4FK66 AC164567.1-201ENSMUST00000219185 960 ntBASIC17.66■□□□□ 0.42
Prpf38aQ4FK66 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC17.66■□□□□ 0.42
Prpf38aQ4FK66 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Prpf38aQ4FK66 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Prpf38aQ4FK66 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Prpf38aQ4FK66 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Prpf38aQ4FK66 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Prpf38aQ4FK66 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Prpf38aQ4FK66 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Prpf38aQ4FK66 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Prpf38aQ4FK66 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC17.66■□□□□ 0.42
Prpf38aQ4FK66 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Prpf38aQ4FK66 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Prpf38aQ4FK66 Gm27528-202ENSMUST00000222916 2012 ntBASIC17.65■□□□□ 0.42
Prpf38aQ4FK66 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Prpf38aQ4FK66 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Prpf38aQ4FK66 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Prpf38aQ4FK66 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Prpf38aQ4FK66 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Prpf38aQ4FK66 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Prpf38aQ4FK66 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Prpf38aQ4FK66 Celf4-206ENSMUST00000224553 1729 ntBASIC17.65■□□□□ 0.42
Prpf38aQ4FK66 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Prpf38aQ4FK66 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC17.65■□□□□ 0.42
Prpf38aQ4FK66 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC17.65■□□□□ 0.42
Prpf38aQ4FK66 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Prpf38aQ4FK66 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Prpf38aQ4FK66 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Prpf38aQ4FK66 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Prpf38aQ4FK66 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC17.65■□□□□ 0.42
Prpf38aQ4FK66 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Prpf38aQ4FK66 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Prpf38aQ4FK66 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Prpf38aQ4FK66 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Prpf38aQ4FK66 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC17.65■□□□□ 0.42
Prpf38aQ4FK66 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Prpf38aQ4FK66 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Prpf38aQ4FK66 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
Prpf38aQ4FK66 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Prpf38aQ4FK66 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Prpf38aQ4FK66 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC17.65■□□□□ 0.42
Prpf38aQ4FK66 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Prpf38aQ4FK66 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Prpf38aQ4FK66 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.41
Prpf38aQ4FK66 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Prpf38aQ4FK66 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Prpf38aQ4FK66 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC17.64■□□□□ 0.41
Prpf38aQ4FK66 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Prpf38aQ4FK66 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Prpf38aQ4FK66 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Prpf38aQ4FK66 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC17.64■□□□□ 0.41
Prpf38aQ4FK66 Gm15593-201ENSMUST00000122085 1008 ntBASIC17.64■□□□□ 0.41
Prpf38aQ4FK66 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC17.64■□□□□ 0.41
Prpf38aQ4FK66 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC17.64■□□□□ 0.41
Prpf38aQ4FK66 Gm43125-201ENSMUST00000201724 730 ntBASIC17.64■□□□□ 0.41
Prpf38aQ4FK66 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Prpf38aQ4FK66 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Prpf38aQ4FK66 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Prpf38aQ4FK66 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Prpf38aQ4FK66 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Prpf38aQ4FK66 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Prpf38aQ4FK66 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Prpf38aQ4FK66 Gm8242-201ENSMUST00000193029 1420 ntBASIC17.64■□□□□ 0.41
Prpf38aQ4FK66 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Prpf38aQ4FK66 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Prpf38aQ4FK66 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Prpf38aQ4FK66 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Prpf38aQ4FK66 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Prpf38aQ4FK66 Gm42901-201ENSMUST00000197735 3171 ntBASIC17.63■□□□□ 0.41
Prpf38aQ4FK66 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Prpf38aQ4FK66 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Prpf38aQ4FK66 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms