Protein–RNA interactions for Protein: Q3UPH7

Arhgef40, Rho guanine nucleotide exchange factor 40, mousemouse

Predictions only

Length 1,517 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Arhgef40Q3UPH7 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Arhgef40Q3UPH7 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Arhgef40Q3UPH7 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Arhgef40Q3UPH7 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Arhgef40Q3UPH7 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Arhgef40Q3UPH7 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
Arhgef40Q3UPH7 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Arhgef40Q3UPH7 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
Arhgef40Q3UPH7 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC22.06■■□□□ 1.12
Arhgef40Q3UPH7 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC22.06■■□□□ 1.12
Arhgef40Q3UPH7 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC22.06■■□□□ 1.12
Arhgef40Q3UPH7 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Arhgef40Q3UPH7 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC22.05■■□□□ 1.12
Arhgef40Q3UPH7 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
Arhgef40Q3UPH7 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Arhgef40Q3UPH7 Gm5357-201ENSMUST00000212720 1924 ntBASIC22.05■■□□□ 1.12
Arhgef40Q3UPH7 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC22.05■■□□□ 1.12
Arhgef40Q3UPH7 Cd63-ps-201ENSMUST00000145417 875 ntBASIC22.05■■□□□ 1.12
Arhgef40Q3UPH7 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC22.05■■□□□ 1.12
Arhgef40Q3UPH7 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC22.05■■□□□ 1.12
Arhgef40Q3UPH7 AC238811.1-201ENSMUST00000225302 441 ntBASIC22.05■■□□□ 1.12
Arhgef40Q3UPH7 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Arhgef40Q3UPH7 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Arhgef40Q3UPH7 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Arhgef40Q3UPH7 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Arhgef40Q3UPH7 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC22.04■■□□□ 1.12
Arhgef40Q3UPH7 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Arhgef40Q3UPH7 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Arhgef40Q3UPH7 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Arhgef40Q3UPH7 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Arhgef40Q3UPH7 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Arhgef40Q3UPH7 Gm4204-201ENSMUST00000110798 1231 ntBASIC22.04■■□□□ 1.12
Arhgef40Q3UPH7 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC22.04■■□□□ 1.12
Arhgef40Q3UPH7 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Arhgef40Q3UPH7 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Arhgef40Q3UPH7 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
Arhgef40Q3UPH7 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Arhgef40Q3UPH7 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Arhgef40Q3UPH7 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Arhgef40Q3UPH7 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Arhgef40Q3UPH7 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
Arhgef40Q3UPH7 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Arhgef40Q3UPH7 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC22.03■■□□□ 1.12
Arhgef40Q3UPH7 Gm12859-201ENSMUST00000117834 427 ntBASIC22.03■■□□□ 1.12
Arhgef40Q3UPH7 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC22.03■■□□□ 1.12
Arhgef40Q3UPH7 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC22.03■■□□□ 1.12
Arhgef40Q3UPH7 Gm14042-201ENSMUST00000120139 833 ntBASIC22.03■■□□□ 1.12
Arhgef40Q3UPH7 Gm14928-201ENSMUST00000120198 477 ntBASIC22.03■■□□□ 1.12
Arhgef40Q3UPH7 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC22.03■■□□□ 1.12
Arhgef40Q3UPH7 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Arhgef40Q3UPH7 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Arhgef40Q3UPH7 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC22.03■■□□□ 1.12
Arhgef40Q3UPH7 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC22.03■■□□□ 1.12
Arhgef40Q3UPH7 Gm8515-201ENSMUST00000194852 576 ntBASIC22.03■■□□□ 1.12
Arhgef40Q3UPH7 Olfr286-202ENSMUST00000205305 969 ntBASIC22.03■■□□□ 1.12
Arhgef40Q3UPH7 Gm45059-201ENSMUST00000205558 1077 ntBASIC22.03■■□□□ 1.12
Arhgef40Q3UPH7 Gm44719-201ENSMUST00000206404 149 ntBASIC22.03■■□□□ 1.12
Arhgef40Q3UPH7 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC22.03■■□□□ 1.12
Arhgef40Q3UPH7 Gm46209-201ENSMUST00000217912 553 ntBASIC22.03■■□□□ 1.12
Arhgef40Q3UPH7 AC155729.1-201ENSMUST00000227758 544 ntBASIC22.03■■□□□ 1.12
Arhgef40Q3UPH7 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Arhgef40Q3UPH7 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Arhgef40Q3UPH7 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Arhgef40Q3UPH7 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
Arhgef40Q3UPH7 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Arhgef40Q3UPH7 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Arhgef40Q3UPH7 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Arhgef40Q3UPH7 Gm43195-201ENSMUST00000200614 2332 ntBASIC22.03■■□□□ 1.12
Arhgef40Q3UPH7 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Arhgef40Q3UPH7 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Arhgef40Q3UPH7 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
Arhgef40Q3UPH7 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Arhgef40Q3UPH7 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC22.02■■□□□ 1.12
Arhgef40Q3UPH7 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Arhgef40Q3UPH7 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Arhgef40Q3UPH7 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Arhgef40Q3UPH7 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Arhgef40Q3UPH7 AC093043.3-201ENSMUST00000226531 2273 ntBASIC22.02■■□□□ 1.12
Arhgef40Q3UPH7 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Arhgef40Q3UPH7 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Arhgef40Q3UPH7 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
Arhgef40Q3UPH7 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Arhgef40Q3UPH7 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC22.01■■□□□ 1.11
Arhgef40Q3UPH7 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
Arhgef40Q3UPH7 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Arhgef40Q3UPH7 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC22.01■■□□□ 1.11
Arhgef40Q3UPH7 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Arhgef40Q3UPH7 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Arhgef40Q3UPH7 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
Arhgef40Q3UPH7 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC22.01■■□□□ 1.11
Arhgef40Q3UPH7 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Arhgef40Q3UPH7 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
Arhgef40Q3UPH7 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Arhgef40Q3UPH7 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Arhgef40Q3UPH7 Gm45453-201ENSMUST00000211758 853 ntBASIC22.01■■□□□ 1.11
Arhgef40Q3UPH7 AC154239.3-201ENSMUST00000226933 674 ntBASIC22.01■■□□□ 1.11
Arhgef40Q3UPH7 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC22.01■■□□□ 1.11
Arhgef40Q3UPH7 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC22■■□□□ 1.11
Arhgef40Q3UPH7 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC22■■□□□ 1.11
Arhgef40Q3UPH7 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms