Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Brf2Q3UAW9 Gm24589-201ENSMUST00000116692 94 ntBASIC14.32□□□□□ -0.12
Brf2Q3UAW9 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC14.32□□□□□ -0.12
Brf2Q3UAW9 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC14.32□□□□□ -0.12
Brf2Q3UAW9 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC14.32□□□□□ -0.12
Brf2Q3UAW9 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC14.32□□□□□ -0.12
Brf2Q3UAW9 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC14.32□□□□□ -0.12
Brf2Q3UAW9 AC130671.1-201ENSMUST00000227384 1237 ntBASIC14.32□□□□□ -0.12
Brf2Q3UAW9 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Brf2Q3UAW9 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Brf2Q3UAW9 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Brf2Q3UAW9 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Brf2Q3UAW9 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Brf2Q3UAW9 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Brf2Q3UAW9 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Brf2Q3UAW9 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Brf2Q3UAW9 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Brf2Q3UAW9 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Brf2Q3UAW9 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Brf2Q3UAW9 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Brf2Q3UAW9 AC157650.3-201ENSMUST00000225058 1476 ntBASIC14.31□□□□□ -0.12
Brf2Q3UAW9 Gm10584-201ENSMUST00000207036 2628 ntBASIC14.31□□□□□ -0.12
Brf2Q3UAW9 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Brf2Q3UAW9 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Brf2Q3UAW9 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Brf2Q3UAW9 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Brf2Q3UAW9 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Brf2Q3UAW9 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Brf2Q3UAW9 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC14.31□□□□□ -0.12
Brf2Q3UAW9 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC14.31□□□□□ -0.12
Brf2Q3UAW9 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC14.31□□□□□ -0.12
Brf2Q3UAW9 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC14.31□□□□□ -0.12
Brf2Q3UAW9 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Brf2Q3UAW9 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Brf2Q3UAW9 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Brf2Q3UAW9 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC14.31□□□□□ -0.12
Brf2Q3UAW9 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Brf2Q3UAW9 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Brf2Q3UAW9 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Brf2Q3UAW9 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Brf2Q3UAW9 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Brf2Q3UAW9 Gm38042-201ENSMUST00000191614 5208 ntBASIC14.31□□□□□ -0.12
Brf2Q3UAW9 Gm37500-201ENSMUST00000192059 1443 ntBASIC14.31□□□□□ -0.12
Brf2Q3UAW9 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Brf2Q3UAW9 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Brf2Q3UAW9 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Brf2Q3UAW9 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Brf2Q3UAW9 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Brf2Q3UAW9 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
Brf2Q3UAW9 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Brf2Q3UAW9 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Brf2Q3UAW9 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Brf2Q3UAW9 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Brf2Q3UAW9 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Brf2Q3UAW9 Gm25990-201ENSMUST00000102440 86 ntBASIC14.3□□□□□ -0.12
Brf2Q3UAW9 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Brf2Q3UAW9 Gm6089-201ENSMUST00000197666 938 ntBASIC14.3□□□□□ -0.12
Brf2Q3UAW9 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC14.3□□□□□ -0.12
Brf2Q3UAW9 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC14.3□□□□□ -0.12
Brf2Q3UAW9 Rps4l-201ENSMUST00000071745 943 ntBASIC14.3□□□□□ -0.12
Brf2Q3UAW9 Gm3928-201ENSMUST00000121141 1307 ntBASIC14.3□□□□□ -0.12
Brf2Q3UAW9 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC14.3□□□□□ -0.12
Brf2Q3UAW9 Gm18856-201ENSMUST00000178096 1374 ntBASIC14.3□□□□□ -0.12
Brf2Q3UAW9 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Brf2Q3UAW9 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Brf2Q3UAW9 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Brf2Q3UAW9 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC14.3□□□□□ -0.12
Brf2Q3UAW9 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Brf2Q3UAW9 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC14.3□□□□□ -0.12
Brf2Q3UAW9 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Brf2Q3UAW9 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
Brf2Q3UAW9 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Brf2Q3UAW9 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Brf2Q3UAW9 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Brf2Q3UAW9 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Brf2Q3UAW9 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Brf2Q3UAW9 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
Brf2Q3UAW9 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Brf2Q3UAW9 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Brf2Q3UAW9 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Brf2Q3UAW9 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Brf2Q3UAW9 Gm11453-201ENSMUST00000117318 1007 ntBASIC14.29□□□□□ -0.12
Brf2Q3UAW9 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC14.29□□□□□ -0.12
Brf2Q3UAW9 Gm2308-201ENSMUST00000166539 1004 ntBASIC14.29□□□□□ -0.12
Brf2Q3UAW9 Gm6376-201ENSMUST00000209407 580 ntBASIC14.29□□□□□ -0.12
Brf2Q3UAW9 Umpk-ps-201ENSMUST00000211897 827 ntBASIC14.29□□□□□ -0.12
Brf2Q3UAW9 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC14.29□□□□□ -0.12
Brf2Q3UAW9 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC14.29□□□□□ -0.12
Brf2Q3UAW9 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Brf2Q3UAW9 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC14.29□□□□□ -0.12
Brf2Q3UAW9 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Brf2Q3UAW9 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Brf2Q3UAW9 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Brf2Q3UAW9 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Brf2Q3UAW9 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Brf2Q3UAW9 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Brf2Q3UAW9 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Brf2Q3UAW9 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Brf2Q3UAW9 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Brf2Q3UAW9 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 63.1 ms