Protein–RNA interactions for Protein: Q3U827

Rnf180, E3 ubiquitin-protein ligase RNF180, mousemouse

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf180Q3U827 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf180Q3U827 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf180Q3U827 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf180Q3U827 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf180Q3U827 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rnf180Q3U827 Gm7553-201ENSMUST00000185805 1426 ntBASIC17.65■□□□□ 0.42
Rnf180Q3U827 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Rnf180Q3U827 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rnf180Q3U827 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rnf180Q3U827 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rnf180Q3U827 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Rnf180Q3U827 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Rnf180Q3U827 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Rnf180Q3U827 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rnf180Q3U827 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC17.65■□□□□ 0.42
Rnf180Q3U827 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rnf180Q3U827 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rnf180Q3U827 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Rnf180Q3U827 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Rnf180Q3U827 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
Rnf180Q3U827 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Rnf180Q3U827 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC17.64■□□□□ 0.41
Rnf180Q3U827 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Rnf180Q3U827 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rnf180Q3U827 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rnf180Q3U827 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rnf180Q3U827 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
Rnf180Q3U827 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Rnf180Q3U827 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Rnf180Q3U827 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Rnf180Q3U827 Gm42442-201ENSMUST00000197951 1133 ntBASIC17.64■□□□□ 0.41
Rnf180Q3U827 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Rnf180Q3U827 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Rnf180Q3U827 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Rnf180Q3U827 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rnf180Q3U827 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rnf180Q3U827 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Rnf180Q3U827 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rnf180Q3U827 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC17.64■□□□□ 0.41
Rnf180Q3U827 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Rnf180Q3U827 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Rnf180Q3U827 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Rnf180Q3U827 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rnf180Q3U827 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rnf180Q3U827 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rnf180Q3U827 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Rnf180Q3U827 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rnf180Q3U827 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rnf180Q3U827 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Rnf180Q3U827 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Rnf180Q3U827 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
Rnf180Q3U827 Gm13342-201ENSMUST00000121055 207 ntBASIC17.63■□□□□ 0.41
Rnf180Q3U827 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Rnf180Q3U827 Gm27516-201ENSMUST00000184237 98 ntBASIC17.63■□□□□ 0.41
Rnf180Q3U827 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC17.63■□□□□ 0.41
Rnf180Q3U827 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC17.63■□□□□ 0.41
Rnf180Q3U827 Gm9182-201ENSMUST00000217829 639 ntBASIC17.63■□□□□ 0.41
Rnf180Q3U827 AC155258.1-201ENSMUST00000219303 253 ntBASIC17.63■□□□□ 0.41
Rnf180Q3U827 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Rnf180Q3U827 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rnf180Q3U827 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rnf180Q3U827 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rnf180Q3U827 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rnf180Q3U827 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rnf180Q3U827 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC17.63■□□□□ 0.41
Rnf180Q3U827 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Rnf180Q3U827 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Rnf180Q3U827 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rnf180Q3U827 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rnf180Q3U827 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rnf180Q3U827 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rnf180Q3U827 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rnf180Q3U827 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rnf180Q3U827 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rnf180Q3U827 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
Rnf180Q3U827 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rnf180Q3U827 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rnf180Q3U827 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rnf180Q3U827 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC17.62■□□□□ 0.41
Rnf180Q3U827 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC17.62■□□□□ 0.41
Rnf180Q3U827 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC17.62■□□□□ 0.41
Rnf180Q3U827 Gm7593-201ENSMUST00000187246 644 ntBASIC17.62■□□□□ 0.41
Rnf180Q3U827 Mir125a-201ENSMUST00000083545 68 ntBASIC17.62■□□□□ 0.41
Rnf180Q3U827 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rnf180Q3U827 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC17.62■□□□□ 0.41
Rnf180Q3U827 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC17.62■□□□□ 0.41
Rnf180Q3U827 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rnf180Q3U827 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Rnf180Q3U827 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Rnf180Q3U827 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rnf180Q3U827 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rnf180Q3U827 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rnf180Q3U827 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC17.61■□□□□ 0.41
Rnf180Q3U827 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rnf180Q3U827 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rnf180Q3U827 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rnf180Q3U827 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rnf180Q3U827 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Rnf180Q3U827 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rnf180Q3U827 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms