Protein–RNA interactions for Protein: Q3U1D9

UPF0602 protein C4orf47 homolog, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3U1D9 Gm19430-201ENSMUST00000193847 2137 ntBASIC13.17□□□□□ -0.3
Q3U1D9 AC155252.2-201ENSMUST00000226946 680 ntBASIC13.17□□□□□ -0.3
Q3U1D9 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Q3U1D9 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Q3U1D9 Gm8396-201ENSMUST00000057361 823 ntBASIC13.17□□□□□ -0.3
Q3U1D9 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Q3U1D9 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC13.17□□□□□ -0.3
Q3U1D9 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC13.17□□□□□ -0.3
Q3U1D9 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Q3U1D9 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC13.17□□□□□ -0.3
Q3U1D9 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Q3U1D9 Gm45293-201ENSMUST00000209754 1812 ntBASIC13.17□□□□□ -0.3
Q3U1D9 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Q3U1D9 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Q3U1D9 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Q3U1D9 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Q3U1D9 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Q3U1D9 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Q3U1D9 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Q3U1D9 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Q3U1D9 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Q3U1D9 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Q3U1D9 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Q3U1D9 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
Q3U1D9 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Q3U1D9 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Q3U1D9 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Q3U1D9 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Q3U1D9 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Q3U1D9 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Q3U1D9 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Q3U1D9 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Q3U1D9 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Q3U1D9 AC130669.1-201ENSMUST00000228537 1672 ntBASIC13.16□□□□□ -0.3
Q3U1D9 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Q3U1D9 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Q3U1D9 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Q3U1D9 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Q3U1D9 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Q3U1D9 Gm16198-201ENSMUST00000118766 670 ntBASIC13.16□□□□□ -0.3
Q3U1D9 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC13.16□□□□□ -0.3
Q3U1D9 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Q3U1D9 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC13.16□□□□□ -0.3
Q3U1D9 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Q3U1D9 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC13.16□□□□□ -0.3
Q3U1D9 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Q3U1D9 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Q3U1D9 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Q3U1D9 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Q3U1D9 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Q3U1D9 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
Q3U1D9 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Q3U1D9 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Q3U1D9 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Q3U1D9 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Q3U1D9 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC13.15□□□□□ -0.3
Q3U1D9 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Q3U1D9 Gm9867-201ENSMUST00000192212 2647 ntBASIC13.15□□□□□ -0.3
Q3U1D9 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Q3U1D9 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Q3U1D9 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Q3U1D9 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Q3U1D9 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Q3U1D9 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Q3U1D9 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC13.15□□□□□ -0.3
Q3U1D9 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Q3U1D9 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC13.15□□□□□ -0.3
Q3U1D9 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC13.15□□□□□ -0.3
Q3U1D9 Gpr146-202ENSMUST00000053120 1040 ntBASIC13.15□□□□□ -0.3
Q3U1D9 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC13.15□□□□□ -0.3
Q3U1D9 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Q3U1D9 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Q3U1D9 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Q3U1D9 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Q3U1D9 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Q3U1D9 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Q3U1D9 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Q3U1D9 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Q3U1D9 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Q3U1D9 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Q3U1D9 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Q3U1D9 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC13.15□□□□□ -0.31
Q3U1D9 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.31
Q3U1D9 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Q3U1D9 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Q3U1D9 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Q3U1D9 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Q3U1D9 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
Q3U1D9 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Q3U1D9 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
Q3U1D9 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Q3U1D9 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Q3U1D9 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Q3U1D9 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC13.14□□□□□ -0.31
Q3U1D9 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Q3U1D9 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Q3U1D9 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Q3U1D9 Gm15920-201ENSMUST00000118998 402 ntBASIC13.14□□□□□ -0.31
Q3U1D9 Gm11745-201ENSMUST00000121669 448 ntBASIC13.14□□□□□ -0.31
Q3U1D9 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 62.6 ms