Protein–RNA interactions for Protein: Q3U1D0

Lins1, Protein Lines homolog 1, mousemouse

Predictions only

Length 764 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lins1Q3U1D0 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Lins1Q3U1D0 AC130669.1-201ENSMUST00000228537 1672 ntBASIC18.03■□□□□ 0.48
Lins1Q3U1D0 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Lins1Q3U1D0 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Lins1Q3U1D0 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Lins1Q3U1D0 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Lins1Q3U1D0 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Lins1Q3U1D0 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Lins1Q3U1D0 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Lins1Q3U1D0 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Lins1Q3U1D0 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC18.02■□□□□ 0.48
Lins1Q3U1D0 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
Lins1Q3U1D0 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC18.02■□□□□ 0.48
Lins1Q3U1D0 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Lins1Q3U1D0 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC18.02■□□□□ 0.48
Lins1Q3U1D0 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC18.02■□□□□ 0.48
Lins1Q3U1D0 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Lins1Q3U1D0 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC18.02■□□□□ 0.48
Lins1Q3U1D0 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Lins1Q3U1D0 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Lins1Q3U1D0 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Lins1Q3U1D0 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Lins1Q3U1D0 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Lins1Q3U1D0 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Lins1Q3U1D0 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
Lins1Q3U1D0 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Lins1Q3U1D0 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Lins1Q3U1D0 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Lins1Q3U1D0 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC18.02■□□□□ 0.47
Lins1Q3U1D0 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Lins1Q3U1D0 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Lins1Q3U1D0 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
Lins1Q3U1D0 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Lins1Q3U1D0 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Lins1Q3U1D0 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Lins1Q3U1D0 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Lins1Q3U1D0 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC18.01■□□□□ 0.47
Lins1Q3U1D0 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Lins1Q3U1D0 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Lins1Q3U1D0 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Lins1Q3U1D0 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Lins1Q3U1D0 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC18.01■□□□□ 0.47
Lins1Q3U1D0 AC140397.2-201ENSMUST00000224213 834 ntBASIC18.01■□□□□ 0.47
Lins1Q3U1D0 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Lins1Q3U1D0 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Lins1Q3U1D0 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Lins1Q3U1D0 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Lins1Q3U1D0 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Lins1Q3U1D0 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Lins1Q3U1D0 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Lins1Q3U1D0 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
Lins1Q3U1D0 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Lins1Q3U1D0 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Lins1Q3U1D0 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Lins1Q3U1D0 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Lins1Q3U1D0 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Lins1Q3U1D0 Gm10584-201ENSMUST00000207036 2628 ntBASIC18.01■□□□□ 0.47
Lins1Q3U1D0 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Lins1Q3U1D0 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Lins1Q3U1D0 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC18■□□□□ 0.47
Lins1Q3U1D0 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Lins1Q3U1D0 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC18■□□□□ 0.47
Lins1Q3U1D0 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Lins1Q3U1D0 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC18■□□□□ 0.47
Lins1Q3U1D0 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
Lins1Q3U1D0 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Lins1Q3U1D0 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Lins1Q3U1D0 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC18■□□□□ 0.47
Lins1Q3U1D0 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Lins1Q3U1D0 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC18■□□□□ 0.47
Lins1Q3U1D0 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC18■□□□□ 0.47
Lins1Q3U1D0 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Lins1Q3U1D0 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC18■□□□□ 0.47
Lins1Q3U1D0 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC18■□□□□ 0.47
Lins1Q3U1D0 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC18■□□□□ 0.47
Lins1Q3U1D0 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Lins1Q3U1D0 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Lins1Q3U1D0 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Lins1Q3U1D0 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Lins1Q3U1D0 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC18■□□□□ 0.47
Lins1Q3U1D0 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC18■□□□□ 0.47
Lins1Q3U1D0 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Lins1Q3U1D0 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Lins1Q3U1D0 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Lins1Q3U1D0 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
Lins1Q3U1D0 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Lins1Q3U1D0 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC18■□□□□ 0.47
Lins1Q3U1D0 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Lins1Q3U1D0 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Lins1Q3U1D0 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Lins1Q3U1D0 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Lins1Q3U1D0 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Lins1Q3U1D0 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Lins1Q3U1D0 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Lins1Q3U1D0 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Lins1Q3U1D0 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Lins1Q3U1D0 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Lins1Q3U1D0 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Lins1Q3U1D0 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Lins1Q3U1D0 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC17.99■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms